Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G100520 Manihot esculenta HOM05D007562 ORTHO05D009721 0.0e+00 1735.3 919 100.0
Potri.010G222200 Populus trichocarpa HOM05D007562 ORTHO05D009721 3.0e-179 633.3 984 43.5
Duzib114G0316 Durio zibethinus HOM05D007562 ORTHO05D009721 8.2e-137 492.3 992 36.6
CiPaw.01G273100 Carya illinoinensis HOM05D007562 ORTHO05D009721 1.8e-136 491.1 999 36.8
Thecc.10G073300 Theobroma cacao HOM05D007562 ORTHO05D009721 7.0e-136 489.2 998 37.4
QL08p056015 Quercus lobata HOM05D007562 ORTHO05D009721 7.2e-133 479.2 993 37.1
Atru.chr12.774 Acer truncatum HOM05D007562 ORTHO05D009721 4.8e-129 466.5 955 38.1
GSVIVG01016281001 Vitis vinifera HOM05D007562 ORTHO05D009721 2.5e-117 427.6 983 34.4
Ciclev10033298m.g Citrus clementina HOM05D007562 ORTHO05D009721 8.0e-116 422.5 956 34.8
Atru.chr12.749 Acer truncatum HOM05D007562 ORTHO05D009721 4.0e-115 420.2 966 37.3
Gohir.A06G167500 Gossypium hirsutum HOM05D007562 ORTHO05D009721 2.2e-105 387.9 908 34.3
Lalb_Chr19g0129691 Lupinus albus HOM05D007562 ORTHO05D009721 1.2e-103 382.1 1009 31.9
TWI63G1657 Tripterygium wilfordii HOM05D007562 ORTHO05D009721 3.5e-103 380.6 980 33.6
Gohir.D06G174900 Gossypium hirsutum HOM05D007562 ORTHO05D009721 2.3e-102 377.9 909 34.2
Gorai.010G205300 Gossypium raimondii HOM05D007562 ORTHO05D009721 3.9e-102 377.1 979 33.5
MD07G1174900 Malus domestica HOM05D007562 ORTHO05D009721 3.9e-102 377.1 974 33.4
Prupe.2G214000 Prunus persica HOM05D007562 ORTHO05D009721 2.9e-97 360.9 972 32.2
Lj2g0025537 Lotus japonicus HOM05D007562 ORTHO05D009721 7.8e-95 352.8 968 33.3
Glyma.16G154800 Glycine max HOM05D007562 ORTHO05D009721 2.3e-94 351.3 1001 31.8
FAN03G1079 Fragaria x ananassa HOM05D007562 ORTHO05D009721 1.1e-93 349.0 970 31.6
FvH4_7g19620 Fragaria vesca HOM05D007562 ORTHO05D009721 3.3e-93 347.4 971 31.4
Rhsim09G0152200 Rhododendron simsii HOM05D007562 ORTHO05D009721 7.3e-93 346.3 964 32.3
RcHm_v2.0_Chr1g0363431 Rosa chinensis HOM05D007562 ORTHO05D009721 4.7e-92 343.6 970 32.5
Ciclev10033468m.g Citrus clementina HOM05D007562 ORTHO05D009721 1.4e-91 342.0 552 41.3
FAN01G2123 Fragaria x ananassa HOM05D007562 ORTHO05D009721 1.4e-91 342.0 970 31.6
Phvul.004G082400 Phaseolus vulgaris HOM05D007562 ORTHO05D009721 6.8e-91 339.7 983 31.3
TAR629G1307 Trochodendron aralioides HOM05D007562 ORTHO05D009721 5.8e-90 336.7 1060 30.8
Ciclev10033636m.g Citrus clementina HOM05D007562 ORTHO05D009721 2.9e-89 334.3 527 41.9
Ciclev10033616m.g Citrus clementina HOM05D007562 ORTHO05D009721 1.9e-88 331.6 834 33.2
VMungo0464G0183 Vigna mungo HOM05D007562 ORTHO05D009721 1.0e-86 325.9 996 31.0
Dinv11774 Davidia involucrata HOM05D007562 ORTHO05D009721 3.9e-86 323.9 631 38.2
Eucgr.G02827 Eucalyptus grandis HOM05D007562 ORTHO05D009721 3.3e-85 320.9 1003 31.4
Ciclev10033649m.g Citrus clementina HOM05D007562 ORTHO05D009721 9.6e-85 319.3 574 39.4
arahy.Tifrunner.gnm1.ann1.264L58 Arachis hypogaea HOM05D007562 ORTHO05D009721 1.6e-84 318.5 965 30.4
FAN10G0414 Fragaria x ananassa HOM05D007562 ORTHO05D009721 6.2e-84 316.6 848 33.1
Cfa021509 Carpinus fangiana HOM05D007562 ORTHO05D009721 1.8e-83 315.1 929 30.8
COL.COLO4_23667 Corchorus olitorius HOM05D007562 ORTHO05D009721 1.5e-82 312.0 506 44.5
Cc09_g02120 Coffea canephora HOM05D007562 ORTHO05D009721 9.9e-82 309.3 953 30.0
CSS0037048 Camellia sinensis var. sinensis HOM05D007562 ORTHO05D009721 1.9e-80 305.1 955 30.4
Medtr6g060178 Medicago truncatula HOM05D007562 ORTHO05D009721 5.4e-80 303.5 957 30.0
Haze_16895 Corylus avellana HOM05D007562 ORTHO05D009721 7.8e-79 299.7 929 30.2
Ca_04680_v3 Cicer arietinum L. HOM05D007562 ORTHO05D009721 1.0e-78 299.3 670 34.3
ClCG05G020990 Citrullus lanatus HOM05D007562 ORTHO05D009721 5.1e-78 297.0 547 38.4
MELO3C012431.2 Cucumis melo HOM05D007562 ORTHO05D009721 7.3e-77 293.1 566 37.5
CsaV3_5G036330 Cucumis sativus L. HOM05D007562 ORTHO05D009721 6.9e-75 286.6 566 36.9
Aqoxy1G01241 Aquilegia oxysepala HOM05D007562 ORTHO05D009721 1.9e-69 268.5 1055 27.9
A02p02820 Brassica napus HOM05D007562 ORTHO05D009721 9.0e-67 259.6 659 32.5
Cpa.g.sc53.80 Carica papaya HOM05D007562 ORTHO05D009721 4.9e-65 253.8 342 48.2
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 4.9e-65 253.8 836 29.2
C02p07440 Brassica napus HOM05D007562 ORTHO05D009721 1.4e-64 252.3 591 33.5
BraA02t05255Z Brassica rapa HOM05D007562 ORTHO05D009721 5.5e-64 250.4 590 33.4
Oeu043937.1 Olea europaea HOM05D007562 ORTHO05D009721 7.9e-63 246.5 920 28.3
BcaC03g13438 Brassica carinata HOM05D007562 ORTHO05D009721 3.9e-62 244.2 581 34.3
Sp6g29050 Schrenkiella parvula HOM05D007562 ORTHO05D009721 2.5e-61 241.5 582 33.2
CARHR198320 Cardamine hirsuta HOM05D007562 ORTHO05D009721 3.3e-61 241.1 554 34.1
Carub.0006s1315 Capsella rubella HOM05D007562 ORTHO05D009721 4.3e-61 240.7 636 32.4
TPR.G20136 Trifolium pratense HOM05D007562 ORTHO05D009721 7.4e-61 240.0 614 32.6
Thhalv10015291m.g Eutrema salsugineum HOM05D007562 ORTHO05D009721 1.6e-60 238.8 476 35.1
Peaxi162Scf00072g00627 Petunia axillaris HOM05D007562 ORTHO05D009721 4.8e-60 237.3 957 27.3
Nitab4.5_0000575g0170 Nicotiana tabacum HOM05D007562 ORTHO05D009721 6.2e-60 236.9 964 28.3
BolC2t06675H Brassica oleracea HOM05D000286 ORTHO05D009721 2.4e-59 235.0 628 31.1
Nn4g24611 Nelumbo nucifera HOM05D007562 ORTHO05D009721 5.3e-59 233.8 1121 26.0
AL6G25790 Arabidopsis lyrata HOM05D007562 ORTHO05D009721 3.4e-58 231.1 663 31.2
AT5G14990 Arabidopsis thaliana HOM05D007562 ORTHO05D009721 4.9e-57 227.3 581 31.8
Sed0018277 Sechium edule HOM05D007562 ORTHO05D009721 2.5e-56 224.9 587 32.2
Solyc04g049440.2 Solanum lycopersicum HOM05D007562 ORTHO05D009721 6.0e-55 220.3 568 31.5
PSO063G7346 Papaver somniferum HOM05D007562 ORTHO05D009721 1.3e-54 219.2 1023 26.7
Nitab4.5_0010206g0020 Nicotiana tabacum HOM05D007562 ORTHO05D009721 6.7e-54 216.9 552 33.2
PGR142G4136 Punica granatum HOM05D007562 ORTHO05D009721 8.7e-54 216.5 592 32.3
Ciclev10033702m.g Citrus clementina HOM05D007562 ORTHO05D009721 6.9e-51 206.8 354 40.7
MBI10_g06724_MAGBIO Magnolia biondii HOM05D007562 ORTHO05D009721 1.2e-50 206.1 584 32.0
PSO339G1903 Papaver somniferum HOM05D007562 ORTHO05D009721 5.0e-49 200.7 942 26.5
Aa31LG11G14520 Aethionema arabicum HOM05D007562 ORTHO05D009721 1.1e-45 189.5 478 32.6
DCAR_004783 Daucus carota HOM05D007562 ORTHO05D009721 6.5e-41 173.7 625 28.2
Sc20g0001880 Simmondsia chinensis HOM05D007562 ORTHO05D009721 5.7e-37 160.6 292 38.0
CDE08G0023 Ceratophyllum demersum HOM05D007562 ORTHO05D009721 1.2e-31 142.9 311 34.1
SGA_v2.0_scaffold71G24023 Striga asiatica HOM05D007562 ORTHO05D009721 1.6e-31 142.5 559 27.7
Cc09_g02140 Coffea canephora HOM05D007562 ORTHO05D009721 1.1e-27 129.8 212 42.0
SalBow3G0440 Salvia bowleyana HOM05D007562 ORTHO05D009721 1.1e-27 129.8 593 27.2
FAN06G4675 Fragaria x ananassa HOM05D007562 ORTHO05D009721 2.4e-27 128.6 234 35.9
Cpa.g.sc53.79 Carica papaya HOM05D007562 ORTHO05D009721 9.1e-27 126.7 316 32.6
Migut.F01779 Erythranthe guttata HOM05D007562 ORTHO05D009721 5.7e-21 107.5 217 35.9
Psat1g112000 Pisum sativum HOM05D007562 ORTHO05D009721 2.0e-18 99.0 616 22.2
Zm00001eb077110 Zea mays HOM05D007562 ORTHO05D009721 5.9e-18 97.4 262 28.6
ECA233G5285 Erigeron canadensis HOM05D007562 ORTHO05D009721 5.0e-17 94.4 258 32.9
Lsat_1_v5_gn_8_19320 Lactuca sativa HOM05D007562 ORTHO05D009721 2.5e-16 92.0 240 30.4
Os04g0521600 Oryza sativa ssp. japonica HOM05D007562 ORTHO05D004736 6.1e-15 87.4 285 27.4
Glyma.02G073401 Glycine max HOM05D007562 ORTHO05D009721 1.2e-13 83.2 281 28.5
Actinidia38851 Actinidia chinensis HOM05D007562 ORTHO05D009721 2.1e-07 62.4 182 26.9
Cpa.g.sc53.78 Carica papaya HOM05D007562 ORTHO05D009721 3.6e-07 61.6 221 22.6
Haze_20436 Corylus avellana HOM05D007562 ORTHO05D009721 5.2e-06 57.8 204 29.9
Potri.011G164400 Populus trichocarpa HOM05D004088 ORTHO05D004736 8.9e-06 57.0 565 21.1


User provided reference genes

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