Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G098500 Manihot esculenta HOM05D007556 ORTHO05D002252 8.7e-84 314.3 230 100.0
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 6.8e-28 128.6 96 72.9
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 2.5e-22 110.2 90 64.4
Manes.10G047933 Manihot esculenta HOM05D007556 ORTHO05D002252 5.7e-11 72.4 80 52.5
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.2e-09 66.6 92 44.6
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 3.2e-09 66.6 86 39.5
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 3.2e-09 66.6 101 38.6
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 3.2e-09 66.6 103 39.8
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 4.1e-09 66.2 90 44.4
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 5.4e-09 65.9 98 38.8
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 7.0e-09 65.5 89 42.7
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 9.2e-09 65.1 90 42.2
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 9.2e-09 65.1 82 45.1
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 9.2e-09 65.1 86 39.5
Psat5g006560 Pisum sativum HOM05D010359 ORTHO05D002252 1.2e-08 64.7 81 49.4
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 1.6e-08 64.3 86 37.2
Psat5g006520 Pisum sativum HOM05D010359 ORTHO05D002252 2.0e-08 63.9 80 48.8
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 2.0e-08 63.9 103 37.9
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 3.5e-08 63.2 97 38.1
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.5e-08 63.2 92 44.6
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 5.9e-08 62.4 86 39.5
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 5.9e-08 62.4 86 39.5
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.9e-08 62.4 92 43.5
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 5.9e-08 62.4 77 42.9
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 5.9e-08 62.4 92 43.5
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 7.8e-08 62.0 91 36.3
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 7.8e-08 62.0 90 40.0
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-07 61.6 73 43.8
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.0e-07 61.6 92 42.4
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 1.0e-07 61.6 90 35.6
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 1.0e-07 61.6 89 34.8
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 1.7e-07 60.8 83 41.0
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 1.7e-07 60.8 97 35.1
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.7e-07 60.8 92 43.5
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 2.3e-07 60.5 89 37.1
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 2.3e-07 60.5 86 34.9
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 2.3e-07 60.5 96 31.2
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 2.3e-07 60.5 95 37.9
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 2.9e-07 60.1 95 41.1
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 2.9e-07 60.1 90 41.1
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 3.9e-07 59.7 86 47.7
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 3.9e-07 59.7 86 34.9
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 3.9e-07 59.7 81 38.3
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 3.9e-07 59.7 87 34.5
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.0e-07 59.3 75 44.0
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 5.0e-07 59.3 84 32.1
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.6e-07 58.9 91 37.4
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.6e-07 58.9 91 37.4
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 6.6e-07 58.9 94 39.4
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 6.6e-07 58.9 94 40.4
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 8.6e-07 58.5 100 34.0
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 8.6e-07 58.5 77 39.0
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 8.6e-07 58.5 81 35.8
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 1.1e-06 58.2 91 34.1
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.1e-06 58.2 93 38.7
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.9e-06 57.4 85 43.5
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 1.9e-06 57.4 94 38.3
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 2.5e-06 57.0 85 37.6
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 2.5e-06 57.0 96 32.3
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 3.3e-06 56.6 77 40.3
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 4.3e-06 56.2 96 36.5
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 5.6e-06 55.8 107 36.4
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 5.6e-06 55.8 91 36.3
Nitab4.5_0000959g0100 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.6e-06 55.8 80 46.2
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 5.6e-06 55.8 94 38.3
CsaV3_2G014630 Cucumis sativus L. HOM05D007227 ORTHO05D002252 7.3e-06 55.5 91 38.5
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 7.3e-06 55.5 90 32.2
Medtr3g007880 Medicago truncatula HOM05D007227 ORTHO05D002252 7.3e-06 55.5 96 29.2
Atru.chr5.2995 Acer truncatum HOM05D007556 ORTHO05D002252 9.5e-06 55.1 74 45.9
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 9.5e-06 55.1 91 37.4


User provided reference genes

Program Settings