Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 4.4e-110 401.4 209 100.0
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.0e-21 107.8 109 57.8
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.4e-20 104.0 116 55.2
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 3.2e-20 102.8 115 55.7
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 1.6e-19 100.5 124 51.6
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 7.9e-19 98.2 133 49.6
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 7.9e-19 98.2 129 47.3
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 1.0e-18 97.8 107 56.1
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.6e-16 90.5 110 52.7
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 6.2e-16 88.6 111 51.4
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 8.2e-16 88.2 109 53.2
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 1.1e-15 87.8 119 47.9
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 1.2e-14 84.3 118 47.5
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 2.0e-14 83.6 130 41.5
CiPaw.13G036700 Carya illinoinensis HOM05D008140 ORTHO05D009650 5.8e-14 82.0 118 45.8
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 1.0e-13 81.3 101 46.5
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 1.7e-13 80.5 160 39.4
THA.LOC104803169 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 8.4e-13 78.2 143 39.9
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 5.5e-12 75.5 116 44.8
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 9.3e-12 74.7 113 44.2
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 1.2e-11 74.3 111 45.9
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.2e-11 74.3 97 45.4
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 3.5e-11 72.8 144 38.9
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 4.6e-11 72.4 106 41.5
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 6.1e-11 72.0 140 40.7
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 6.1e-11 72.0 132 38.6
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 6.1e-11 72.0 128 39.8
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 7.9e-11 71.6 107 44.9
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 7.9e-11 71.6 114 45.6
Nitab4.5_0002878g0060 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.0e-10 71.2 97 44.3
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 1.0e-10 71.2 106 40.6
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 1.3e-10 70.9 100 47.0
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.3e-10 70.9 122 37.7
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 1.3e-10 70.9 122 41.8
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 1.8e-10 70.5 111 44.1
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.3e-10 70.1 103 40.8
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 3.9e-10 69.3 116 44.0
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 3.9e-10 69.3 116 44.0
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 5.1e-10 68.9 116 44.0
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 5.1e-10 68.9 107 42.1
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 6.7e-10 68.6 116 43.1
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 6.7e-10 68.6 114 44.7
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 6.7e-10 68.6 104 39.4
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 1.1e-09 67.8 96 37.5
QL04p041480 Quercus lobata HOM05D008140 ORTHO05D009650 1.1e-09 67.8 154 35.1
Cfa011235 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.5e-09 67.4 91 47.3
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.5e-09 67.4 98 38.8
CARHR133500 Cardamine hirsuta HOM05D008140 ORTHO05D009650 4.3e-09 65.9 147 35.4
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 4.3e-09 65.9 123 39.8
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 9.7e-09 64.7 113 41.6
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 2.2e-08 63.5 97 39.2
CiPaw.13G036900 Carya illinoinensis HOM05D008140 ORTHO05D009650 2.8e-08 63.2 135 35.6
AL4G36090 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 3.7e-08 62.8 137 37.2
Cpa.g.sc19.24 Carica papaya HOM05D008140 ORTHO05D009650 4.8e-08 62.4 97 45.4
QL04p041665 Quercus lobata HOM05D008140 ORTHO05D009650 4.8e-08 62.4 111 39.6
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 4.8e-08 62.4 155 32.3
AT2G38790 Arabidopsis thaliana HOM05D008140 ORTHO05D009650 6.3e-08 62.0 107 43.0
CiPaw.14G029100 Carya illinoinensis HOM05D008140 ORTHO05D009650 8.2e-08 61.6 117 36.8
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.4e-07 60.8 110 37.3
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 1.4e-07 60.8 94 38.3
A03p21600 Brassica napus HOM05D008140 ORTHO05D009650 1.8e-07 60.5 126 38.1
BraA03t11396Z Brassica rapa HOM05D008140 ORTHO05D009650 1.8e-07 60.5 126 38.1
Carub.0004s2081 Capsella rubella HOM05D008140 ORTHO05D009650 4.1e-07 59.3 108 39.8
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 6.9e-07 58.5 96 38.5
BcaC02g12023 Brassica carinata HOM05D008140 ORTHO05D009650 1.5e-06 57.4 104 39.4
A05p07380 Brassica napus HOM05D008140 ORTHO05D009650 1.5e-06 57.4 116 38.8
BraA05t19703Z Brassica rapa HOM05D008140 ORTHO05D009650 1.5e-06 57.4 116 38.8
Migut.F00890 Erythranthe guttata HOM05D009634 ORTHO05D009650 1.5e-06 57.4 98 36.7
A05p07360 Brassica napus HOM05D008140 ORTHO05D009650 2.0e-06 57.0 118 39.0
C04p08800 Brassica napus HOM05D008140 ORTHO05D009650 2.0e-06 57.0 104 39.4
BraA05t19701Z Brassica rapa HOM05D008140 ORTHO05D009650 2.0e-06 57.0 118 39.0
TAR636G0417 Trochodendron aralioides HOM05D008140 ORTHO05D009650 2.0e-06 57.0 129 38.0
BolC4t22473H Brassica oleracea HOM05D008140 ORTHO05D009650 3.4e-06 56.2 104 39.4
CANSAT56G1901 Cannabis sativa HOM05D008140 ORTHO05D009650 4.5e-06 55.8 110 39.1
PGR142G1448 Punica granatum HOM05D008140 ORTHO05D009650 7.7e-06 55.1 101 38.6
Sc09g0005560 Simmondsia chinensis HOM05D008140 ORTHO05D009650 1.0e-05 54.7 107 32.7


User provided reference genes

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