Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 4.4e-186 654.4 325 100.0
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 2.7e-159 565.5 325 85.2
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 1.7e-124 449.9 327 69.4
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.3e-123 444.9 323 68.1
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.6e-122 443.4 325 68.3
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 2.7e-122 442.6 325 68.6
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 3.8e-121 438.7 321 67.9
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 3.0e-118 429.1 323 67.8
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 3.0e-118 429.1 328 65.5
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 5.2e-118 428.3 333 65.2
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 1.2e-117 427.2 335 64.8
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 3.4e-117 425.6 325 66.5
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 2.4e-115 419.5 330 62.4
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 7.0e-115 417.9 328 64.0
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 5.9e-114 414.8 325 64.0
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 1.7e-113 413.3 354 62.4
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 2.2e-113 412.9 325 63.1
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 5.0e-113 411.8 336 61.3
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 5.5e-112 408.3 320 63.1
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 5.5e-112 408.3 320 63.1
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 2.1e-111 406.4 318 65.4
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 2.1e-111 406.4 335 62.7
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 3.6e-111 405.6 328 62.5
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 4.7e-111 405.2 328 62.5
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 8.0e-111 404.4 302 66.2
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 1.8e-110 403.3 340 60.0
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 6.8e-110 401.4 325 60.6
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 8.3e-108 394.4 330 60.0
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 7.0e-107 391.3 325 60.6
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 3.5e-106 389.0 325 60.6
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 4.5e-106 388.7 335 59.4
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 5.9e-106 388.3 329 60.2
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.0e-105 387.5 325 60.0
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 1.3e-105 387.1 332 60.2
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 1.7e-105 386.7 325 59.4
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.5e-104 383.6 334 59.3
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 3.0e-102 375.9 330 58.5
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.5e-101 373.6 322 58.7
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 2.6e-101 372.9 334 55.7
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 3.4e-101 372.5 330 56.4
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 3.4e-101 372.5 335 60.3
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 4.4e-101 372.1 333 56.8
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 5.7e-101 371.7 335 55.8
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 9.8e-101 370.9 323 59.8
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.3e-100 370.5 337 56.7
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 6.4e-100 368.2 333 55.9
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 1.1e-99 367.5 324 59.9
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 1.8e-99 366.7 359 52.9
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 2.4e-99 366.3 325 56.3
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 4.1e-99 365.5 331 55.9
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 5.4e-99 365.2 324 59.0
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 5.4e-99 365.2 265 67.2
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 7.0e-99 364.8 335 55.2
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 1.6e-98 363.6 351 52.4
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 4.6e-98 362.1 334 55.4
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 5.9e-98 361.7 332 55.7
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 1.0e-97 360.9 334 54.8
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 6.6e-97 358.2 355 54.9
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 8.6e-97 357.8 354 53.4
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.9e-96 356.7 305 58.4
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 2.1e-95 353.2 300 58.3
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 2.1e-95 353.2 353 50.7
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 3.6e-95 352.4 349 53.6
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 1.0e-94 350.9 325 54.8
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 1.4e-94 350.5 377 50.4
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.8e-94 350.1 358 50.6
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 4.0e-94 349.0 326 54.0
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 4.0e-94 349.0 301 57.8
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 8.9e-94 347.8 306 55.6
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 1.5e-93 347.1 350 51.4
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 2.0e-93 346.7 357 50.1
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 2.0e-93 346.7 301 57.5
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 4.4e-93 345.5 334 54.8
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 1.3e-92 344.0 338 51.8
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 4.9e-92 342.0 326 54.6
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 8.3e-92 341.3 343 51.6
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 2.4e-91 339.7 323 54.8
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 3.2e-91 339.3 333 54.1
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 5.4e-91 338.6 336 54.2
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 9.2e-91 337.8 255 66.7
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.2e-90 337.4 326 53.7
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.2e-90 337.4 343 53.4
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 1.6e-90 337.0 351 51.9
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 2.0e-90 336.7 282 63.5
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 1.7e-89 333.6 331 52.6
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 3.0e-89 332.8 362 47.8
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 3.9e-89 332.4 319 53.6
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 5.0e-89 332.0 325 52.9
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 1.1e-88 330.9 341 52.8
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.5e-88 330.5 364 47.0
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 3.3e-88 329.3 362 47.2
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 1.2e-87 327.4 364 46.7
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 2.1e-87 326.6 348 54.9
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.3e-86 323.2 337 51.6
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 1.2e-85 320.9 378 48.7
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 2.0e-85 320.1 345 50.4
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 8.3e-84 314.7 355 51.8
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.0e-81 307.8 361 50.4
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.2e-74 284.3 307 51.1
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.7e-65 253.8 362 40.3
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 2.3e-65 253.4 219 54.8
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 8.4e-60 235.0 202 56.4
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.8e-55 219.9 333 41.4
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 8.4e-52 208.4 333 40.2
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 3.2e-51 206.5 179 57.5
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 2.5e-48 196.8 242 41.3
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 1.4e-46 191.0 321 38.0
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 4.0e-46 189.5 318 37.4
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.7e-42 176.8 210 46.2
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 1.1e-38 164.9 240 37.1
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.3e-38 162.5 208 42.3
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.7e-36 157.5 203 40.9
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.4e-35 154.5 209 42.1
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.6e-34 151.0 212 38.7
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.9e-34 148.7 202 40.1
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.3e-33 147.9 206 37.4
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.3e-33 147.1 202 39.6
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 6.7e-33 145.6 195 39.0
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 7.4e-32 142.1 209 37.8
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 7.7e-29 132.1 121 56.2
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.2e-26 124.8 150 41.3
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 3.0e-25 120.2 115 55.7
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 4.8e-23 112.8 184 34.2
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.1e-22 111.7 85 64.7
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 8.5e-20 102.1 129 46.5
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 1.5e-11 74.7 94 42.6
Eucgr.G02303 Eucalyptus grandis HOM05D000548 ORTHO05D001552 3.1e-06 57.0 249 24.5


User provided reference genes

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