Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 2.0e-299 1031.6 497 100.0
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 1.3e-221 773.1 488 75.0
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 3.8e-213 745.0 494 70.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 8.8e-210 733.8 488 70.9
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 1.7e-208 729.6 499 68.3
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 2.8e-208 728.8 500 69.2
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.0e-205 720.3 481 70.1
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 1.9e-204 716.1 500 68.8
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 3.2e-204 715.3 479 70.6
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 3.2e-204 715.3 474 71.9
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.0e-202 710.3 493 69.2
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 1.8e-202 709.5 494 70.0
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.0e-202 708.8 493 69.0
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 4.0e-202 708.4 493 69.0
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.2e-201 706.8 493 69.0
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-201 706.1 493 69.0
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 4.4e-201 704.9 496 66.7
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.3e-200 703.4 493 69.0
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.7e-200 701.8 497 68.0
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.7e-200 701.8 497 68.0
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.3e-200 700.7 497 68.0
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-199 698.7 497 67.4
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.1e-199 698.7 496 67.3
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.0e-199 697.6 497 67.6
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.0e-198 696.0 497 67.4
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.7e-197 693.0 499 65.9
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.1e-196 690.3 499 66.5
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 3.0e-194 682.2 402 78.1
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.2e-193 680.2 500 65.2
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 5.7e-193 677.9 484 67.6
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.3e-192 676.8 491 67.8
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 1.7e-192 676.4 400 77.0
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 9.2e-191 670.6 483 66.5
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 2.9e-189 665.6 399 76.9
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 1.5e-188 663.3 500 63.2
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 1.5e-188 663.3 495 66.3
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 7.3e-188 661.0 496 65.3
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 7.3e-188 661.0 491 66.6
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 6.1e-187 657.9 397 76.6
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 1.0e-186 657.1 488 64.5
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 1.2e-185 653.7 490 65.7
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 2.0e-185 652.9 504 62.9
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 2.0e-185 652.9 486 64.6
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 9.8e-185 650.6 493 63.7
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 1.7e-184 649.8 492 65.2
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 1.8e-183 646.4 488 63.5
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 3.2e-183 645.6 499 65.1
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 3.2e-183 645.6 491 64.2
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 3.2e-183 645.6 494 62.3
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 5.4e-183 644.8 496 64.7
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 5.4e-183 644.8 487 64.3
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 5.4e-183 644.8 499 64.5
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 4.6e-182 641.7 495 63.6
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.3e-181 640.2 472 64.6
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 6.6e-181 637.9 400 74.2
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 8.6e-181 637.5 400 73.0
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 1.5e-180 636.7 403 74.7
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 4.3e-180 635.2 404 73.0
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 5.6e-180 634.8 485 64.1
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 5.6e-180 634.8 407 72.2
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 2.1e-179 632.9 505 61.0
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 1.0e-178 630.6 359 79.9
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 3.4e-177 625.5 486 62.6
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 7.5e-177 624.4 486 62.3
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.7e-176 623.2 400 72.2
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 2.2e-176 622.9 416 69.2
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 2.9e-176 622.5 486 61.5
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 6.4e-176 621.3 395 72.2
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 8.3e-176 620.9 492 60.0
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 2.0e-174 616.3 400 71.0
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 6.0e-174 614.8 370 76.2
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.7e-173 613.2 397 72.0
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 2.3e-173 612.8 395 71.1
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 1.5e-172 610.1 399 70.4
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 3.1e-170 602.4 392 72.2
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 4.0e-170 602.1 402 69.7
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 2.1e-166 589.7 402 67.4
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 2.5e-164 582.8 371 72.0
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 2.8e-163 579.3 401 68.1
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 9.9e-161 570.9 501 56.7
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 4.9e-160 568.5 368 70.4
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 3.2e-159 565.8 356 73.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 5.4e-159 565.1 402 65.9
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 6.6e-157 558.1 358 70.9
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 1.1e-156 557.4 464 59.3
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 6.2e-155 551.6 352 71.9
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 1.4e-154 550.4 504 56.2
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 8.9e-154 547.7 447 60.6
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 4.6e-150 535.4 489 53.6
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 1.3e-149 533.9 485 56.7
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 5.6e-148 528.5 409 61.6
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 5.8e-129 465.3 395 54.9
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 7.6e-129 464.9 293 75.8
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 3.7e-123 446.0 354 61.3
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 1.4e-122 444.1 387 56.1
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 1.3e-117 427.6 469 50.7
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 1.7e-104 384.0 407 48.2
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 6.3e-99 365.5 293 59.4
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 9.4e-87 325.1 211 70.1
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.4e-82 311.2 428 40.4
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 2.1e-78 297.4 440 39.5
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 2.9e-67 260.4 444 36.9
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.9e-67 260.4 302 44.7
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 7.5e-60 235.7 161 67.1
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 1.4e-58 231.5 400 36.8
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 1.1e-42 178.7 201 48.8
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 9.9e-36 155.6 323 31.0
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 4.0e-29 133.7 93 71.0
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 9.0e-29 132.5 317 31.2
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 4.5e-20 103.6 73 69.9
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 5.8e-20 103.2 279 28.3
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 4.8e-14 83.6 59 62.7
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 1.0e-08 65.9 80 47.5


User provided reference genes

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