Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G082254 Manihot esculenta HOM05D012182 ORTHO05D011238 4.2e-94 348.2 199 100.0
Manes.04G059132 Manihot esculenta HOM05D012182 ORTHO05D011238 8.2e-66 254.2 198 77.3
Manes.18G138854 Manihot esculenta HOM05D012182 ORTHO05D011238 2.4e-65 252.7 198 79.3
Manes.15G153266 Manihot esculenta HOM05D012182 ORTHO05D011238 1.3e-50 203.8 131 88.5
Manes.06G045801 Manihot esculenta HOM05D012182 ORTHO05D011238 1.2e-48 197.2 198 65.2
Manes.18G062550 Manihot esculenta HOM05D012182 ORTHO05D011238 2.9e-47 192.6 200 67.0
Manes.05G127901 Manihot esculenta HOM05D012182 ORTHO05D011238 3.6e-45 185.7 126 88.1
Manes.14G163433 Manihot esculenta HOM05D012182 ORTHO05D011238 8.5e-39 164.5 128 79.7
Manes.14G027972 Manihot esculenta HOM05D012182 ORTHO05D000014 4.0e-36 155.6 126 77.0
Manes.02G210140 Manihot esculenta HOM05D000023 ORTHO05D000014 1.3e-15 87.4 187 35.8
Manes.17G022697 Manihot esculenta HOM05D012182 ORTHO05D011238 2.3e-15 86.7 60 81.7
CSS0026734 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.3e-14 81.6 49 71.4
CSS0017579 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.5e-14 81.3 49 71.4
CSS0044422 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.5e-14 81.3 49 71.4
CSS0049353 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 9.5e-14 81.3 49 71.4
CSS0045728 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.2e-13 80.9 49 69.4
Manes.09G075056 Manihot esculenta HOM05D012182 ORTHO05D011238 1.2e-13 80.9 219 37.0
CSS0004804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.1e-13 80.1 49 71.4
CSS0006701 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.1e-13 80.1 49 69.4
CSS0045108 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-12 77.4 49 69.4
Dinv15899 Davidia involucrata HOM05D013973 ORTHO05D011238 1.4e-12 77.4 80 47.5
Dinv21131 Davidia involucrata HOM05D013973 ORTHO05D011238 2.6e-11 73.2 51 62.7
Dinv01017 Davidia involucrata HOM05D013973 ORTHO05D011238 2.4e-09 66.6 48 58.3
Hund20069 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.2e-09 66.2 59 52.5
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 5.4e-09 65.5 96 43.8
Duzib063G0003 Durio zibethinus HOM05D053098 ORTHO05D011238 7.0e-09 65.1 77 41.6
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.2e-09 64.7 59 50.8
Hund03452 Selenicereus undatus HOM05D000185 ORTHO05D000014 9.2e-09 64.7 59 50.8
Ah.03g144780 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.2e-08 64.3 116 35.3
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.2e-08 64.3 71 50.7
Gorai.005G223300 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.2e-08 64.3 71 50.7
Gorai.010G071800 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.2e-08 64.3 71 50.7
Gorai.011G148700 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.2e-08 64.3 71 50.7
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.2e-08 64.3 59 49.2
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-08 63.9 59 50.8
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-08 63.9 59 50.8
Hund10834 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-08 63.9 87 42.5
Hund26432 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.6e-08 63.9 93 39.8
Actinidia31591 Actinidia chinensis HOM05D013973 ORTHO05D011238 2.0e-08 63.5 68 52.9
AUR62017483 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.0e-08 63.5 59 50.8
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.0e-08 63.5 59 50.8
Hund09827 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.7e-08 63.2 59 49.2
Gorai.007G113800 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.5e-08 62.8 60 51.7
Ah.06g187040 Amaranthus hybridus HOM05D012182 ORTHO05D011238 4.6e-08 62.4 71 43.7
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.0e-08 62.0 82 41.5
Psat1g136240 Pisum sativum HOM05D008981 ORTHO05D011238 7.8e-08 61.6 49 57.1
Hund25537 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.8e-08 61.6 70 45.7
Gohir.A01G142850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 1.0e-07 61.2 60 50.0
Gorai.002G161200 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.0e-07 61.2 71 49.3
AUR62034279 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.3e-07 60.8 48 58.3
Gorai.011G164900 Gossypium raimondii HOM05D000023 ORTHO05D009195 2.3e-07 60.1 60 50.0
Hund04619 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.0e-07 59.7 60 45.0
Gorai.007G179100 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.9e-07 59.3 71 47.9
Psat7g035080 Pisum sativum HOM05D008981 ORTHO05D011238 3.9e-07 59.3 49 57.1
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.9e-07 59.3 79 41.8
Hund17894 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.9e-07 59.3 59 47.5
Hund18171 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.6e-07 58.5 91 38.5
Hund17738 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.6e-07 58.2 56 46.4
Psat2g165840 Pisum sativum HOM05D008981 ORTHO05D011238 1.5e-06 57.4 47 57.4
Manes.02G214160 Manihot esculenta HOM05D012182 ORTHO05D250532 1.9e-06 57.0 113 54.9
TPR.G32077 Trifolium pratense HOM05D000023 ORTHO05D000014 1.9e-06 57.0 48 56.2
Gorai.002G112900 Gossypium raimondii HOM05D000023 ORTHO05D000014 4.3e-06 55.8 60 46.7
Gohir.A06G098402 Gossypium hirsutum HOM05D000023 ORTHO05D000014 5.6e-06 55.5 60 46.7
Hund09996 Selenicereus undatus HOM05D000023 ORTHO05D009195 5.6e-06 55.5 129 34.1
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 5.6e-06 55.5 51 47.1
Hund23857 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.5e-06 54.7 46 52.2


User provided reference genes

Program Settings