Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 5.3e-53 210.7 102 100.0
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 3.2e-34 148.3 92 76.1
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 4.5e-28 127.9 93 69.9
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 4.2e-26 121.3 93 66.7
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.2e-25 119.8 93 67.7
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.6e-25 119.4 93 61.3
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 1.6e-25 119.4 92 63.0
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 2.3e-24 115.5 92 59.8
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 8.9e-24 113.6 92 62.0
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 8.9e-24 113.6 94 57.4
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.2e-23 113.2 93 63.4
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.2e-23 113.2 93 63.4
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 1.5e-23 112.8 92 62.0
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 1.5e-23 112.8 80 73.8
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.5e-23 112.8 93 63.4
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 3.4e-23 111.7 92 62.0
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 3.4e-23 111.7 92 59.8
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 7.5e-23 110.5 93 61.3
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 9.8e-23 110.2 94 58.5
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 9.8e-23 110.2 94 61.7
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.7e-22 109.4 92 58.7
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 1.7e-22 109.4 91 59.3
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 4.9e-22 107.8 92 58.7
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 4.9e-22 107.8 93 57.0
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 6.3e-22 107.5 93 58.1
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 6.3e-22 107.5 93 54.8
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 8.3e-22 107.1 92 55.4
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 8.3e-22 107.1 92 57.6
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.1e-21 106.7 93 60.2
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.1e-21 106.7 93 53.8
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.1e-21 106.7 91 56.0
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.4e-21 106.3 93 53.8
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 2.4e-21 105.5 94 54.3
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 3.1e-21 105.1 92 58.7
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 3.1e-21 105.1 93 61.3
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 4.1e-21 104.8 92 53.3
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 5.4e-21 104.4 92 57.6
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.4e-21 104.4 93 58.1
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.4e-21 104.4 93 59.1
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 5.4e-21 104.4 92 56.5
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 7.0e-21 104.0 92 55.4
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 9.2e-21 103.6 93 51.6
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 9.2e-21 103.6 92 56.5
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.6e-20 102.8 92 52.2
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.6e-20 102.8 92 52.2
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.6e-20 102.8 92 52.2
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.6e-20 102.8 92 53.3
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.6e-20 102.8 92 54.3
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 2.0e-20 102.4 92 51.1
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 2.0e-20 102.4 91 54.9
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 2.0e-20 102.4 91 56.0
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 2.7e-20 102.1 93 55.9
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 3.5e-20 101.7 91 51.6
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 3.5e-20 101.7 92 52.2
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 3.5e-20 101.7 93 53.8
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 4.5e-20 101.3 91 58.2
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 4.5e-20 101.3 93 53.8
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 5.9e-20 100.9 91 53.8
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 5.9e-20 100.9 91 56.0
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 5.9e-20 100.9 91 52.7
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 5.9e-20 100.9 92 56.5
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 5.9e-20 100.9 92 54.3
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 5.9e-20 100.9 92 54.3
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.3e-19 99.8 92 50.0
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 1.7e-19 99.4 92 51.1
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 1.7e-19 99.4 91 53.8
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 2.9e-19 98.6 93 55.9
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.9e-19 98.6 92 57.6
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 2.9e-19 98.6 92 52.2
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 2.9e-19 98.6 92 53.3
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 5.0e-19 97.8 93 53.8
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 6.6e-19 97.4 91 52.7
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 6.6e-19 97.4 91 49.5
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 8.6e-19 97.1 101 50.5
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 8.6e-19 97.1 98 51.0
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 1.5e-18 96.3 91 51.6
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 1.9e-18 95.9 92 55.4
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 2.5e-18 95.5 93 49.5
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 2.5e-18 95.5 93 58.1
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 2.5e-18 95.5 92 48.9
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 4.3e-18 94.7 92 48.9
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 7.3e-18 94.0 92 53.3
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 9.5e-18 93.6 92 51.1
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 9.5e-18 93.6 93 54.8
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.2e-17 93.2 93 49.5
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 1.6e-17 92.8 93 50.5
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 1.6e-17 92.8 93 50.5
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 2.8e-17 92.0 92 51.1
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 3.6e-17 91.7 93 48.4
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 4.7e-17 91.3 93 48.4
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 8.0e-17 90.5 92 50.0
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 4.0e-16 88.2 91 48.4
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 6.8e-16 87.4 94 43.6
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 8.9e-16 87.0 90 47.8
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 8.9e-16 87.0 91 48.4
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.2e-15 86.7 94 45.7
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 1.5e-15 86.3 100 48.0
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 4.4e-15 84.7 93 47.3
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 2.2e-14 82.4 89 47.2
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 3.7e-14 81.6 92 47.8
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 6.4e-14 80.9 91 45.1
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 8.3e-14 80.5 71 62.0
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 1.8e-13 79.3 128 36.7
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.6e-12 76.3 93 48.4
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.6e-12 74.7 93 48.4
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 7.8e-12 73.9 93 48.4
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 3.9e-11 71.6 96 34.4
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 2.5e-10 68.9 43 74.4
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 6.2e-09 64.3 98 34.7
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.1e-08 63.5 121 33.1
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 1.1e-08 63.5 100 36.0
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 2.0e-07 59.3 81 46.9
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.4e-07 58.5 99 34.3
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 4.9e-06 54.7 42 57.1
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 8.3e-06 53.9 46 50.0


User provided reference genes

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