Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G074028 Manihot esculenta HOM05D003845 ORTHO05D004161 3.7e-64 248.1 126 100.0
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 1.7e-37 159.5 90 90.0
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 3.5e-30 135.2 96 74.0
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 2.3e-29 132.5 96 71.9
Haze_14141 Corylus avellana HOM05D003845 ORTHO05D004161 3.9e-29 131.7 79 82.3
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 8.6e-29 130.6 96 70.8
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 7.3e-28 127.5 96 69.8
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 7.3e-28 127.5 96 68.8
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 7.3e-28 127.5 90 72.2
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 1.2e-27 126.7 90 72.2
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 1.2e-27 126.7 87 72.4
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 1.6e-27 126.3 96 68.8
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 2.1e-27 125.9 96 67.7
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 2.8e-27 125.6 96 68.8
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 2.8e-27 125.6 78 79.5
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 1.1e-26 123.6 89 73.0
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 2.4e-26 122.5 90 70.0
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 3.1e-26 122.1 89 70.8
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 3.1e-26 122.1 89 69.7
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 5.2e-26 121.3 87 67.8
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 6.8e-26 120.9 96 65.6
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 6.8e-26 120.9 89 69.7
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 6.8e-26 120.9 96 65.6
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 1.2e-25 120.2 85 71.8
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.2e-25 120.2 80 73.8
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 1.5e-25 119.8 89 68.5
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.5e-25 119.8 80 72.5
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 2.0e-25 119.4 87 65.5
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 3.4e-25 118.6 87 71.3
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.4e-25 118.2 96 64.6
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 4.4e-25 118.2 96 64.6
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 7.6e-25 117.5 96 64.6
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 7.6e-25 117.5 86 66.3
EL10Ac2g04610 Beta vulgaris HOM05D003845 ORTHO05D004161 7.6e-25 117.5 107 59.8
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 1.7e-24 116.3 96 64.6
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 2.2e-24 115.9 86 66.3
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 3.8e-24 115.2 107 60.7
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 6.4e-24 114.4 100 64.0
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 6.4e-24 114.4 80 71.2
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 8.4e-24 114.0 100 61.0
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 1.9e-23 112.8 89 66.3
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 4.2e-23 111.7 107 57.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 9.3e-23 110.5 99 60.6
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 1.2e-22 110.2 107 58.9
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 1.2e-22 110.2 107 57.9
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.2e-22 110.2 107 57.9
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 2.7e-22 109.0 89 64.0
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 4.6e-22 108.2 80 63.8
Cpa.g.sc3785.2 Carica papaya HOM05D003845 ORTHO05D004161 4.6e-22 108.2 74 75.7
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 4.6e-22 108.2 107 57.0
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 6.0e-22 107.8 80 67.5
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 6.0e-22 107.8 89 64.0
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 7.8e-22 107.5 100 61.0
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 7.8e-22 107.5 100 61.0
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 7.8e-22 107.5 100 61.0
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 7.8e-22 107.5 89 62.9
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 7.8e-22 107.5 89 64.0
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.0e-21 107.1 85 64.7
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.0e-21 107.1 85 64.7
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 1.0e-21 107.1 85 64.7
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 1.7e-21 106.3 119 52.1
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 2.3e-21 105.9 89 62.9
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 2.3e-21 105.9 89 62.9
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 2.3e-21 105.9 89 62.9
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 3.0e-21 105.5 89 59.6
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 3.0e-21 105.5 86 62.8
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 3.0e-21 105.5 117 51.3
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 3.9e-21 105.1 85 63.5
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 5.1e-21 104.8 75 66.7
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 8.7e-21 104.0 87 63.2
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.1e-20 103.6 89 62.9
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 1.5e-20 103.2 80 66.2
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 1.5e-20 103.2 80 66.2
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.5e-20 103.2 75 66.7
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 1.9e-20 102.8 80 65.0
Ca_04078_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 1.9e-20 102.8 89 60.7
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 1.9e-20 102.8 89 59.6
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 3.3e-20 102.1 80 65.0
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 3.3e-20 102.1 80 65.0
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 4.3e-20 101.7 107 54.2
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 5.6e-20 101.3 76 68.4
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 7.3e-20 100.9 76 67.1
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 7.3e-20 100.9 80 65.0
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 7.3e-20 100.9 96 57.3
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 7.3e-20 100.9 85 63.5
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 7.3e-20 100.9 85 57.6
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 7.3e-20 100.9 85 57.6
CAN.G178.11 Capsicum annuum HOM05D007284 ORTHO05D009303 1.6e-19 99.8 78 65.4
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 2.1e-19 99.4 72 69.4
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 3.1e-18 95.5 80 60.0
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 6.9e-18 94.4 68 67.6
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 9.0e-18 94.0 89 58.4
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 1.2e-17 93.6 88 53.4
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 3.4e-17 92.0 80 58.8
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 2.4e-15 85.9 80 55.0
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 9.3e-15 84.0 73 49.3
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 1.7e-13 79.7 72 50.0
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 4.3e-12 75.1 73 49.3
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 4.3e-12 75.1 74 43.2
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 7.9e-06 54.3 39 64.1


User provided reference genes

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