Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G071796 Manihot esculenta HOM05D006980 ORTHO05D008704 5.9e-20 101.7 45 100.0
Manes.09G055100 Manihot esculenta HOM05D006980 ORTHO05D008704 1.2e-17 94.0 45 93.3
Potri.006G068700 Populus trichocarpa HOM05D006980 ORTHO05D008704 5.0e-11 72.0 42 69.0
Prupe.7G109800 Prunus persica HOM05D006980 ORTHO05D008704 5.0e-11 72.0 45 66.7
Sabra06G0051200 Salix brachista HOM05D006980 ORTHO05D008704 8.5e-11 71.2 42 66.7
SHI12421 Sapria himalayana HOM05D006980 ORTHO05D008704 3.2e-10 69.3 45 66.7
Ah.02g130100 Amaranthus hybridus HOM05D006980 ORTHO05D008704 1.2e-09 67.4 45 66.7
QL07p038724 Quercus lobata HOM05D006980 ORTHO05D008704 1.6e-09 67.0 44 61.4
QL07p038975 Quercus lobata HOM05D006980 ORTHO05D008704 1.6e-09 67.0 44 61.4
Actinidia05428 Actinidia chinensis HOM05D006980 ORTHO05D008704 2.7e-09 66.2 45 60.0
CiPaw.09G014400 Carya illinoinensis HOM05D006980 ORTHO05D008704 2.7e-09 66.2 44 61.4
Rhsim03G0075000 Rhododendron simsii HOM05D006980 ORTHO05D008704 2.7e-09 66.2 45 57.8
Lj1g0023344 Lotus japonicus HOM05D006980 ORTHO05D008704 4.7e-09 65.5 45 60.0
Cfa016610 Carpinus fangiana HOM05D006980 ORTHO05D008704 6.1e-09 65.1 45 57.8
Haze_19614 Corylus avellana HOM05D006980 ORTHO05D008704 1.0e-08 64.3 44 56.8
Dinv21206 Davidia involucrata HOM05D006980 ORTHO05D008704 1.0e-08 64.3 42 64.3
Atru.chr8.1533 Acer truncatum HOM05D006980 ORTHO05D008704 2.3e-08 63.2 45 57.8
TWI77G0642 Tripterygium wilfordii HOM05D006980 ORTHO05D008704 2.3e-08 63.2 42 57.1
Cc00_g27900 Coffea canephora HOM05D006980 ORTHO05D008704 3.0e-08 62.8 42 57.1
SalBow3G1904 Salvia bowleyana HOM05D006980 ORTHO05D008704 3.0e-08 62.8 45 55.6
EL10Ac6g13708 Beta vulgaris HOM05D006980 ORTHO05D008704 6.7e-08 61.6 42 61.9
CSS0041599 Camellia sinensis var. sinensis HOM05D006980 ORTHO05D008704 8.8e-08 61.2 44 59.1
AUR62014076 Chenopodium quinoa HOM05D006980 ORTHO05D008704 1.1e-07 60.8 42 59.5
FvH4_6g18780 Fragaria vesca HOM05D006980 ORTHO05D008704 1.1e-07 60.8 45 57.8
FAN14G4048 Fragaria x ananassa HOM05D006980 ORTHO05D008704 1.1e-07 60.8 45 57.8
RcHm_v2.0_Chr3g0473791 Rosa chinensis HOM05D006980 ORTHO05D008704 2.6e-07 59.7 45 55.6
Sc02g0000270 Simmondsia chinensis HOM05D006980 ORTHO05D008704 3.3e-07 59.3 42 54.8
SalBow5G2618 Salvia bowleyana HOM05D004325 ORTHO05D005470 4.4e-07 58.9 45 51.1
Ciclev10011570m.g Citrus clementina HOM05D006980 ORTHO05D008704 5.7e-07 58.5 42 54.8
Cpa.g.sc166.4 Carica papaya HOM05D006980 ORTHO05D008704 7.4e-07 58.2 44 50.0
AUR62005415 Chenopodium quinoa HOM05D006980 ORTHO05D008704 7.4e-07 58.2 42 57.1
CsaV3_6G007180 Cucumis sativus L. HOM05D006980 ORTHO05D008704 7.4e-07 58.2 42 61.9
Cc02_g28460 Coffea canephora HOM05D006980 ORTHO05D008704 9.7e-07 57.8 42 52.4
Lj2P137T25 Lonicera japonica HOM05D006980 ORTHO05D008704 9.7e-07 57.8 42 57.1
FAN02G3599 Fragaria x ananassa HOM05D006980 ORTHO05D008704 1.3e-06 57.4 45 53.3
Oeu056884.1 Olea europaea HOM05D006980 ORTHO05D008704 1.3e-06 57.4 42 52.4
GSVIVG01029738001 Vitis vinifera HOM05D006980 ORTHO05D008704 1.3e-06 57.4 42 50.0
MELO3C022409.2 Cucumis melo HOM05D006980 ORTHO05D008704 1.7e-06 57.0 42 59.5
Lsat_1_v5_gn_5_164841 Lactuca sativa HOM05D006980 ORTHO05D008704 1.7e-06 57.0 45 51.1
ClCG06G001250 Citrullus lanatus HOM05D006980 ORTHO05D008704 2.2e-06 56.6 42 57.1
FAN05G0477 Fragaria x ananassa HOM05D006980 ORTHO05D008704 2.2e-06 56.6 45 53.3
FAN05G0999 Fragaria x ananassa HOM05D006980 ORTHO05D008704 2.2e-06 56.6 45 53.3
Medtr7g104640 Medicago truncatula HOM05D006980 ORTHO05D008704 3.7e-06 55.8 42 52.4
Migut.J01034 Erythranthe guttata HOM05D006980 ORTHO05D008704 4.8e-06 55.5 42 57.1
HanXRQChr02g0032651 Helianthus annuus HOM05D006980 ORTHO05D008704 6.3e-06 55.1 42 50.0
CAN.G137.42 Capsicum annuum HOM05D006980 ORTHO05D008704 8.2e-06 54.7 45 51.1
Nitab4.5_0000025g0100 Nicotiana tabacum HOM05D006980 ORTHO05D008704 8.2e-06 54.7 42 52.4
TPR.G19555 Trifolium pratense HOM05D006980 ORTHO05D008704 8.2e-06 54.7 42 50.0


User provided reference genes

Program Settings