Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 3.0e-120 435.3 228 100.0
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 5.3e-93 344.7 231 79.7
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 2.0e-92 342.8 231 78.8
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 2.0e-92 342.8 231 78.8
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 1.3e-91 340.1 231 79.2
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 4.0e-85 318.5 229 72.9
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 4.0e-85 318.5 229 73.4
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 9.0e-85 317.4 232 75.9
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 9.0e-85 317.4 226 73.0
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 1.2e-84 317.0 231 70.6
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 1.5e-84 316.6 232 75.4
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.5e-84 316.6 229 72.9
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 3.4e-84 315.5 233 70.8
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 1.7e-83 313.2 233 70.4
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 6.5e-83 311.2 226 70.8
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 7.1e-82 307.8 231 72.3
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 9.3e-82 307.4 230 73.5
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 3.5e-81 305.4 234 71.8
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 3.9e-80 302.0 231 72.7
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 5.1e-80 301.6 236 70.3
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 8.7e-80 300.8 223 70.9
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 3.3e-79 298.9 237 69.6
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 9.7e-79 297.4 226 70.4
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 1.3e-78 297.0 231 65.4
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 1.3e-78 297.0 232 70.3
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 1.6e-78 296.6 226 70.8
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 2.2e-78 296.2 230 71.3
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 6.3e-78 294.7 229 70.7
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 1.1e-77 293.9 241 67.6
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 5.3e-77 291.6 223 71.3
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 9.0e-77 290.8 225 68.9
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 9.0e-77 290.8 225 68.9
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 1.2e-76 290.4 226 66.8
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 1.2e-76 290.4 235 64.7
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 1.2e-76 290.4 231 65.8
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 1.2e-76 290.4 232 69.4
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.0e-75 287.3 216 70.8
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.0e-75 287.3 225 67.1
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 1.3e-75 287.0 202 68.8
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 1.3e-75 287.0 225 70.7
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 1.3e-75 287.0 233 64.8
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 1.3e-75 287.0 231 68.8
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 1.7e-75 286.6 225 67.1
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 2.2e-75 286.2 224 71.9
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 2.2e-75 286.2 229 64.2
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 2.9e-75 285.8 229 63.8
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 3.8e-75 285.4 229 66.8
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 3.8e-75 285.4 236 67.4
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 3.8e-75 285.4 226 64.6
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 5.0e-75 285.0 225 68.4
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 5.0e-75 285.0 225 68.4
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 5.0e-75 285.0 225 68.4
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 6.5e-75 284.6 225 66.2
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 6.5e-75 284.6 225 70.2
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 1.4e-74 283.5 225 68.9
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 1.4e-74 283.5 238 61.3
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 1.9e-74 283.1 225 69.8
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 3.2e-74 282.3 225 70.2
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 4.2e-74 282.0 225 70.2
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 4.2e-74 282.0 225 69.3
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 9.4e-74 280.8 227 64.8
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 1.6e-73 280.0 235 62.1
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 1.6e-73 280.0 230 64.3
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 1.6e-73 280.0 241 62.2
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 2.1e-73 279.6 233 62.7
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 3.6e-73 278.9 187 76.5
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 3.6e-73 278.9 226 68.1
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 6.1e-73 278.1 233 60.9
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 6.1e-73 278.1 238 60.9
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 6.1e-73 278.1 237 63.3
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 1.8e-72 276.6 232 62.1
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.3e-72 276.2 231 62.8
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 2.3e-72 276.2 228 63.2
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 5.1e-72 275.0 206 71.8
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 5.1e-72 275.0 236 65.7
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 5.1e-72 275.0 187 75.4
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 5.1e-72 275.0 233 60.5
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 5.1e-72 275.0 233 60.5
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 8.8e-72 274.2 216 63.9
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 1.1e-71 273.9 202 66.3
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 1.5e-71 273.5 182 69.8
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 2.5e-71 272.7 240 65.4
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 2.5e-71 272.7 233 67.0
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 3.3e-71 272.3 230 63.9
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 3.3e-71 272.3 230 66.1
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 9.7e-71 270.8 224 64.3
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 1.3e-70 270.4 233 63.5
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 4.8e-70 268.5 230 63.0
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 1.8e-69 266.5 235 58.3
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 2.6e-68 262.7 227 67.4
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 1.3e-67 260.4 222 62.2
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 2.9e-67 259.2 226 62.8
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 3.8e-67 258.8 195 70.3
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 5.0e-67 258.5 215 61.4
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 6.5e-67 258.1 182 71.4
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 1.8e-64 250.0 179 70.4
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 1.7e-62 243.4 227 60.8
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 2.2e-62 243.0 228 61.0
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 6.3e-62 241.5 223 61.0
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 8.2e-62 241.1 225 60.4
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.8e-61 240.0 178 68.5
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 4.1e-61 238.8 209 61.7
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.2e-60 237.3 175 70.3
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.3e-59 233.8 178 68.0
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 2.9e-59 232.6 191 63.9
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 7.2e-58 228.0 172 69.8
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 5.0e-51 205.3 140 69.3
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 3.6e-49 199.1 134 66.4
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 2.4e-45 186.4 226 47.8
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 7.0e-45 184.9 140 63.6
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 2.0e-44 183.3 140 62.9
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 2.0e-44 183.3 140 62.9
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 4.5e-44 182.2 140 62.1
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 1.0e-43 181.0 140 60.7
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 1.0e-43 181.0 140 62.1
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 1.3e-43 180.6 140 61.4
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 1.3e-43 180.6 140 61.4
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 5.0e-43 178.7 140 61.4
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 8.5e-43 177.9 140 60.7
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 8.5e-43 177.9 140 60.7
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 8.5e-43 177.9 140 60.7
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 1.5e-42 177.2 140 60.7
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 2.5e-42 176.4 140 60.0
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 2.5e-42 176.4 140 60.0
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 4.2e-42 175.6 141 56.0
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 5.5e-42 175.3 189 52.9
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 2.2e-38 163.3 141 53.2
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 6.3e-38 161.8 102 77.5
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 3.8e-35 152.5 104 76.0
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 6.6e-35 151.8 158 48.1
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 1.9e-34 150.2 226 45.1
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 2.6e-31 139.8 105 68.6
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 1.4e-29 134.0 132 59.1
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 7.0e-29 131.7 151 47.0
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 1.6e-28 130.6 151 45.0
Rhsim07G0202500 Rhododendron simsii HOM05D004659 ORTHO05D005547 4.6e-28 129.0 130 63.1
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 7.8e-28 128.3 175 40.6
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 2.5e-26 123.2 154 43.5
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 4.7e-25 119.0 93 64.5
GSVIVG01032650001 Vitis vinifera HOM05D004659 ORTHO05D005547 1.0e-24 117.9 224 41.5
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 3.7e-22 109.4 203 40.4
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 6.0e-20 102.1 146 37.0
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 1.3e-19 100.9 199 31.2
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 3.0e-19 99.8 71 63.4
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 3.9e-19 99.4 151 36.4
Actinidia38237 Actinidia chinensis HOM05D004659 ORTHO05D005547 5.6e-18 95.5 99 57.6
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 2.8e-17 93.2 59 76.3
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.1e-13 81.3 109 41.3
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 1.9e-13 80.5 101 43.6
Medtr3g058560 Medicago truncatula HOM05D004659 ORTHO05D005547 7.3e-10 68.6 48 70.8
AUR62003563 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.2e-06 57.0 80 38.8
AUR62017877 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.2e-06 57.0 80 38.8


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