Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 3.8e-34 147.5 71 100.0
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 6.8e-31 136.7 70 97.1
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 1.6e-27 125.6 70 87.1
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 3.5e-27 124.4 70 87.1
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 7.8e-27 123.2 70 85.7
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.3e-26 122.5 70 85.7
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 1.7e-26 122.1 70 84.3
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 2.3e-26 121.7 70 85.7
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.0e-26 121.3 70 84.3
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 3.0e-26 121.3 69 82.6
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 3.0e-26 121.3 70 85.7
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 3.0e-26 121.3 70 84.3
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 3.9e-26 120.9 70 84.3
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 5.0e-26 120.6 70 84.3
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 6.6e-26 120.2 70 84.3
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 6.6e-26 120.2 70 82.9
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 6.6e-26 120.2 70 82.9
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 8.6e-26 119.8 70 82.9
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 1.1e-25 119.4 70 78.6
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 1.1e-25 119.4 70 81.4
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 1.1e-25 119.4 70 78.6
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 1.5e-25 119.0 70 82.9
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 1.5e-25 119.0 70 81.4
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.9e-25 118.6 70 78.6
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 1.9e-25 118.6 70 78.6
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.9e-25 118.6 70 81.4
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 2.5e-25 118.2 70 80.0
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 3.3e-25 117.9 70 81.4
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 3.3e-25 117.9 70 78.6
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 4.3e-25 117.5 70 78.6
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 4.3e-25 117.5 70 81.4
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 4.3e-25 117.5 70 78.6
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 4.3e-25 117.5 70 78.6
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 5.6e-25 117.1 70 77.1
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 5.6e-25 117.1 69 82.6
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 7.3e-25 116.7 70 77.1
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 7.3e-25 116.7 70 78.6
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 9.5e-25 116.3 70 81.4
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 9.5e-25 116.3 70 78.6
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 9.5e-25 116.3 70 78.6
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 9.5e-25 116.3 70 80.0
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.2e-24 115.9 70 77.1
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 1.2e-24 115.9 70 77.1
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 1.2e-24 115.9 70 77.1
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.2e-24 115.9 70 80.0
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 1.2e-24 115.9 70 77.1
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 2.1e-24 115.2 70 77.1
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 2.8e-24 114.8 70 77.1
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 3.6e-24 114.4 70 77.1
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 6.2e-24 113.6 70 75.7
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 8.0e-24 113.2 70 77.1
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 1.1e-23 112.8 66 81.8
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 5.2e-23 110.5 70 75.7
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 8.9e-23 109.8 70 74.3
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 8.9e-23 109.8 70 74.3
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 8.9e-23 109.8 70 74.3
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 8.9e-23 109.8 70 74.3
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 1.2e-22 109.4 70 74.3
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.2e-22 109.4 70 74.3
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 2.0e-22 108.6 70 74.3
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 5.8e-22 107.1 70 68.6
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 1.7e-21 105.5 70 71.4
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.7e-21 105.5 70 71.4
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 2.2e-21 105.1 70 70.0
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 2.2e-21 105.1 70 70.0
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 2.2e-21 105.1 70 70.0
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 2.2e-21 105.1 70 71.4
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 2.2e-21 105.1 70 71.4
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 4.9e-21 104.0 70 70.0
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 6.4e-21 103.6 70 70.0
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 1.1e-20 102.8 67 68.7
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 1.9e-20 102.1 70 68.6
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 2.4e-20 101.7 70 68.6
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 2.4e-20 101.7 70 68.6
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 2.4e-20 101.7 68 70.6
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 3.2e-20 101.3 70 67.1
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 3.2e-20 101.3 57 78.9
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.7e-19 98.2 71 66.2
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 2.7e-19 98.2 71 66.2
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 3.5e-19 97.8 69 58.0
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 2.3e-18 95.1 70 68.6
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 5.1e-18 94.0 70 65.7
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 2.1e-16 88.6 66 62.1
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 5.2e-15 84.0 69 55.1
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 6.8e-15 83.6 67 59.7
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 5.8e-14 80.5 64 54.7
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 2.4e-12 75.1 68 52.9
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 3.5e-11 71.2 56 60.7
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 3.0e-10 68.2 38 78.9
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 8.6e-10 66.6 67 49.3
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 8.6e-10 66.6 64 51.6
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 8.6e-10 66.6 69 47.8
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 1.9e-09 65.5 35 82.9
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 4.7e-08 60.8 47 55.3
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 8.1e-08 60.1 59 45.8
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 8.9e-07 56.6 88 38.6
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 1.5e-06 55.8 34 79.4
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 2.0e-06 55.5 34 82.4


User provided reference genes

Program Settings