Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G063400 Manihot esculenta HOM05D007407 ORTHO05D009298 1.5e-82 309.7 181 100.0
Potri.009G091800 Populus trichocarpa HOM05D007407 ORTHO05D009298 4.7e-52 208.4 181 62.4
Atru.chr5.2418 Acer truncatum HOM05D007407 ORTHO05D009298 1.0e-51 207.2 181 63.0
Thecc.02G113100 Theobroma cacao HOM05D007407 ORTHO05D009298 1.4e-51 206.8 181 62.4
Ciclev10029563m.g Citrus clementina HOM05D007407 ORTHO05D009298 2.3e-51 206.1 181 63.0
Sabra09G0070800 Salix brachista HOM05D007407 ORTHO05D009298 4.0e-51 205.3 181 61.9
Duzib052G0893 Durio zibethinus HOM05D007407 ORTHO05D009298 1.2e-50 203.8 181 61.9
MD10G1101800 Malus domestica HOM05D007407 ORTHO05D009298 4.4e-50 201.8 180 60.6
Aqoxy6G02771 Aquilegia oxysepala HOM05D007407 ORTHO05D009298 5.7e-50 201.4 181 60.2
TAR628G1347 Trochodendron aralioides HOM05D007407 ORTHO05D009298 1.3e-49 200.3 181 60.8
CiPaw.05G014900 Carya illinoinensis HOM05D007407 ORTHO05D009298 1.7e-49 199.9 181 60.8
ClCG10G010580 Citrullus lanatus HOM05D007407 ORTHO05D009298 1.7e-49 199.9 181 59.1
RcHm_v2.0_Chr6g0254151 Rosa chinensis HOM05D007407 ORTHO05D009298 1.7e-49 199.9 181 61.3
GSVIVG01037877001 Vitis vinifera HOM05D007407 ORTHO05D009298 3.7e-49 198.7 181 60.2
MSTRG.27752 Avicennia marina HOM05D007407 ORTHO05D009298 4.8e-49 198.4 181 58.6
Gohir.A03G184200 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.3e-49 198.0 181 59.1
Gohir.D02G205700 Gossypium hirsutum HOM05D007407 ORTHO05D009298 6.3e-49 198.0 181 59.1
Gorai.005G233100 Gossypium raimondii HOM05D007407 ORTHO05D009298 6.3e-49 198.0 181 59.1
Cc02_g19580 Coffea canephora HOM05D007407 ORTHO05D009298 1.4e-48 196.8 181 58.6
Nn1g04637 Nelumbo nucifera HOM05D007407 ORTHO05D009298 1.4e-48 196.8 181 58.6
QL11p032060 Quercus lobata HOM05D007407 ORTHO05D009298 2.4e-48 196.1 180 60.6
Actinidia34378 Actinidia chinensis HOM05D007407 ORTHO05D009298 3.1e-48 195.7 180 58.9
CsaV3_4G000500 Cucumis sativus L. HOM05D007407 ORTHO05D009298 5.4e-48 194.9 181 58.6
AUR62008735 Chenopodium quinoa HOM05D007407 ORTHO05D009298 7.0e-48 194.5 181 56.9
Oeu044262.1 Olea europaea HOM05D007407 ORTHO05D009298 7.0e-48 194.5 181 58.0
Hma1.2p1_1023F.1_g248940 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 9.1e-48 194.1 179 58.1
RhsimUnG0126400 Rhododendron simsii HOM05D007407 ORTHO05D009298 1.2e-47 193.7 180 58.9
CANSAT25G3533 Cannabis sativa HOM05D007407 ORTHO05D009298 2.7e-47 192.6 181 57.5
Cpa.g.c35560 Carica papaya HOM05D007407 ORTHO05D009298 2.7e-47 192.6 188 58.0
FvH4_2g04570 Fragaria vesca HOM05D007407 ORTHO05D009298 2.7e-47 192.6 181 58.6
FAN27G0322 Fragaria x ananassa HOM05D007407 ORTHO05D009298 2.7e-47 192.6 181 59.1
FAN15G3071 Fragaria x ananassa HOM05D007407 ORTHO05D009298 3.5e-47 192.2 181 59.1
SalBow3G4546 Salvia bowleyana HOM05D007407 ORTHO05D009298 3.5e-47 192.2 181 56.9
CANSAT25G2132 Cannabis sativa HOM05D007407 ORTHO05D009298 4.5e-47 191.8 181 57.5
Sc18g0003630 Simmondsia chinensis HOM05D007407 ORTHO05D009298 4.5e-47 191.8 181 56.9
CAN.G13.9 Capsicum annuum HOM05D007407 ORTHO05D009298 2.3e-46 189.5 181 56.4
Sed0024111 Sechium edule HOM05D007407 ORTHO05D009298 2.9e-46 189.1 181 55.8
Peaxi162Scf00152g00338 Petunia axillaris HOM05D007407 ORTHO05D009298 1.1e-45 187.2 181 56.4
Psat5g233480 Pisum sativum HOM05D007407 ORTHO05D009298 1.1e-45 187.2 181 56.9
Dinv42215 Davidia involucrata HOM05D007407 ORTHO05D009298 1.5e-45 186.8 182 58.8
Lj3g0017118 Lotus japonicus HOM05D007407 ORTHO05D009298 3.3e-45 185.7 181 55.8
Migut.I00274 Erythranthe guttata HOM05D007407 ORTHO05D009298 5.5e-45 184.9 181 55.8
TPR.G5138 Trifolium pratense HOM05D007407 ORTHO05D009298 7.2e-45 184.5 181 55.2
TWI59G1341 Tripterygium wilfordii HOM05D007407 ORTHO05D009298 1.2e-44 183.7 183 57.4
HanXRQChr16g0509111 Helianthus annuus HOM05D007407 ORTHO05D009298 4.7e-44 181.8 178 55.1
Sopen11g019840 Solanum pennellii HOM05D007407 ORTHO05D009298 6.1e-44 181.4 181 54.1
Medtr0393s0040 Medicago truncatula HOM05D007407 ORTHO05D009298 3.0e-43 179.1 178 53.4
Phvul.005G003200 Phaseolus vulgaris HOM05D007407 ORTHO05D009298 1.2e-42 177.2 181 54.1
Glyma.04G111400 Glycine max HOM05D007407 ORTHO05D009298 1.5e-42 176.8 181 54.1
Rhsim11G0155200 Rhododendron simsii HOM05D007407 ORTHO05D009298 2.0e-42 176.4 161 59.6
EL10Ac6g13315 Beta vulgaris HOM05D007407 ORTHO05D009298 4.4e-42 175.3 181 52.5
Eucgr.I01082 Eucalyptus grandis HOM05D007407 ORTHO05D009298 2.2e-41 172.9 164 57.9
Thhalv10026553m.g Eutrema salsugineum HOM05D007407 ORTHO05D009298 2.8e-41 172.6 181 51.4
Medtr3g010320 Medicago truncatula HOM05D007407 ORTHO05D009298 2.8e-41 172.6 181 53.0
SGA_v2.0_scaffold13G06621 Striga asiatica HOM05D007407 ORTHO05D009298 2.8e-41 172.6 224 46.9
Aa31sc211G10 Aethionema arabicum HOM05D007407 ORTHO05D009298 1.1e-40 170.6 181 51.4
Sp7g31660 Schrenkiella parvula HOM05D007407 ORTHO05D009298 1.1e-40 170.6 181 51.4
Lsat_1_v5_gn_7_86121 Lactuca sativa HOM05D007407 ORTHO05D009298 1.4e-40 170.2 161 57.1
Nitab4.5_0000088g0130 Nicotiana tabacum HOM05D007407 ORTHO05D009298 1.4e-40 170.2 166 54.8
Carub.0007s0650 Capsella rubella HOM05D007407 ORTHO05D009298 2.4e-40 169.5 181 50.8
BraA01t00434Z Brassica rapa HOM05D007407 ORTHO05D009298 3.1e-40 169.1 181 50.3
AL7G17500 Arabidopsis lyrata HOM05D007407 ORTHO05D009298 4.1e-40 168.7 181 50.8
CARHR242020 Cardamine hirsuta HOM05D007407 ORTHO05D009298 7.0e-40 167.9 181 50.3
AT4G33925 Arabidopsis thaliana HOM05D007407 ORTHO05D009298 4.5e-39 165.2 181 49.7
DCAR_001669 Daucus carota HOM05D007407 ORTHO05D009298 7.8e-39 164.5 181 49.2
arahy.Tifrunner.gnm1.ann1.2Y2YM1 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.7e-38 163.3 181 50.8
arahy.Tifrunner.gnm1.ann1.D6X9Y4 Arachis hypogaea HOM05D007407 ORTHO05D009298 1.7e-38 163.3 181 50.8
Lalb_Chr18g0048491 Lupinus albus HOM05D007407 ORTHO05D009298 2.3e-38 162.9 181 48.6
vmacro01981 Vaccinium macrocarpon HOM05D007407 ORTHO05D009298 8.6e-38 161.0 176 54.5
Hund12642 Selenicereus undatus HOM05D007407 ORTHO05D009298 1.2e-36 157.1 149 55.7
Glyma.06G322800 Glycine max HOM05D007407 ORTHO05D009298 2.1e-36 156.4 163 52.1
THA.LOC104807229 Tarenaya hassleriana HOM05D007407 ORTHO05D009298 8.0e-36 154.5 153 54.2
Duzib132G0979 Durio zibethinus HOM05D007407 ORTHO05D009298 1.4e-35 153.7 176 48.9
C01p04860 Brassica napus HOM05D007407 ORTHO05D009298 4.0e-35 152.1 186 47.8
ECA236G1324 Erigeron canadensis HOM05D007407 ORTHO05D009298 3.4e-34 149.1 85 82.4
VMungo1080G0753 Vigna mungo HOM05D007407 ORTHO05D009298 1.1e-32 144.1 153 51.0
BolC1t00470H Brassica oleracea HOM05D007407 ORTHO05D009298 2.4e-32 142.9 153 49.7
PGSC0003DMG400023130 Solanum tuberosum HOM05D007407 ORTHO05D009298 3.2e-32 142.5 85 77.6
HPP92_010144 Vanilla planifolia HOM05D007407 ORTHO05D009298 3.2e-32 142.5 184 43.5
MD05G1094600 Malus domestica HOM05D007407 ORTHO05D009298 7.0e-32 141.4 148 52.0
Nitab4.5_0000700g0060 Nicotiana tabacum HOM05D007407 ORTHO05D009298 6.0e-31 138.3 153 50.3
SHI05205 Sapria himalayana HOM05D007407 ORTHO05D009298 6.0e-31 138.3 151 50.3
Manes.07G065401 Manihot esculenta HOM05D007407 ORTHO05D009298 3.0e-30 136.0 70 97.1
Zm00001eb326460 Zea mays HOM05D007407 ORTHO05D009298 3.0e-30 136.0 180 43.9
Solyc11g044330.3 Solanum lycopersicum HOM05D007407 ORTHO05D009298 6.6e-30 134.8 146 51.4
SEGI_09286 Sequoiadendron giganteum HOM05D007407 ORTHO05D009298 4.3e-29 132.1 174 40.2
Prupe.8G139500 Prunus persica HOM05D007407 ORTHO05D009298 1.9e-24 116.7 181 44.8
Pp3c22_18210 Physcomitrium patens HOM05D007407 ORTHO05D009298 3.2e-24 115.9 172 38.4
Hma1.2p1_1023F.1_g248930 Hydrangea macrophylla HOM05D007407 ORTHO05D009298 3.9e-22 109.0 181 41.4
Mapoly0083s0061 Marchantia polymorpha HOM05D007407 ORTHO05D009298 5.1e-22 108.6 162 36.4
AagrBONN_evm.TU.Sc2ySwM_228.2221 Anthoceros agrestis HOM05D007407 ORTHO05D009298 2.9e-17 92.8 159 35.8
SMO330G0043 Selaginella moellendorffii HOM05D007407 ORTHO05D009298 3.5e-15 85.9 84 50.0
CBR_g6331 Chara braunii HOM05D007407 ORTHO05D009298 1.0e-14 84.3 83 51.8
MD00G1205200 Malus domestica HOM05D007407 ORTHO05D009298 1.9e-13 80.1 111 44.1
Cre16.g668000 Chlamydomonas reinhardtii HOM05D007407 ORTHO05D009298 5.6e-13 78.6 159 32.7
MCO15G608 Micromonas commoda HOM05D007407 ORTHO05D009298 2.8e-12 76.3 81 46.9
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 3.1e-11 72.8 49 71.4
Medtr8g072380 Medicago truncatula HOM05D007407 ORTHO05D009298 9.9e-10 67.8 64 53.1
unitig_747.g21223 Utricularia gibba HOM05D007407 ORTHO05D009298 1.1e-08 64.3 47 55.3
Medtr2g093710 Medicago truncatula HOM05D007407 ORTHO05D009298 2.7e-07 59.7 89 37.1


User provided reference genes

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