Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G062364 Manihot esculenta HOM05D000092 ORTHO05D000042 1.3e-117 426.4 210 100.0
Manes.07G062324 Manihot esculenta HOM05D000092 ORTHO05D000042 1.0e-95 353.6 202 87.6
Manes.07G063100 Manihot esculenta HOM05D000092 ORTHO05D000042 1.5e-94 349.7 202 87.1
Manes.07G061500 Manihot esculenta HOM05D000092 ORTHO05D000042 2.6e-94 349.0 202 86.6
Manes.07G060700 Manihot esculenta HOM05D000092 ORTHO05D000042 9.8e-94 347.1 200 88.5
Manes.07G060866 Manihot esculenta HOM05D000092 ORTHO05D000042 3.5e-91 338.6 218 80.3
Manes.07G060708 Manihot esculenta HOM05D000092 ORTHO05D000042 5.9e-91 337.8 202 85.6
Manes.07G062348 Manihot esculenta HOM05D000092 ORTHO05D000042 8.6e-90 334.0 218 80.7
Manes.07G062340 Manihot esculenta HOM05D000092 ORTHO05D000042 5.8e-86 321.2 202 82.7
Manes.07G061980 Manihot esculenta HOM05D000092 ORTHO05D000042 3.7e-85 318.5 206 82.5
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 5.4e-84 314.7 205 82.0
Manes.07G062308 Manihot esculenta HOM05D000092 ORTHO05D000042 3.5e-83 312.0 197 82.2
Manes.07G062800 Manihot esculenta HOM05D000092 ORTHO05D000042 2.4e-76 289.3 163 90.2
Manes.07G060750 Manihot esculenta HOM05D000092 ORTHO05D000042 8.6e-66 254.2 202 68.8
Manes.08G163700 Manihot esculenta HOM05D000092 ORTHO05D000042 1.5e-33 147.1 187 48.1
Manes.07G060300 Manihot esculenta HOM05D000092 ORTHO05D000042 2.9e-29 132.9 84 83.3
Manes.02G215325 Manihot esculenta HOM05D000092 ORTHO05D000042 7.4e-17 91.7 185 35.1
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.1e-15 87.8 210 32.4
Manes.10G028501 Manihot esculenta HOM05D000092 ORTHO05D000042 4.1e-15 85.9 215 33.0
Manes.10G028600 Manihot esculenta HOM05D000092 ORTHO05D000042 5.3e-15 85.5 215 33.0
Manes.02G215300 Manihot esculenta HOM05D000092 ORTHO05D000042 1.5e-14 84.0 216 31.9
Manes.09G159732 Manihot esculenta HOM05D000092 ORTHO05D000042 2.6e-14 83.2 206 33.5
Eucgr.G00700 Eucalyptus grandis HOM05D000092 ORTHO05D000042 4.5e-14 82.4 197 32.5
Manes.11G052130 Manihot esculenta HOM05D000092 ORTHO05D000042 1.0e-13 81.3 206 32.0
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.0e-13 81.3 196 31.1
Medtr6g464030 Medicago truncatula HOM05D000092 ORTHO05D000042 2.9e-13 79.7 211 29.4
Medtr8g059275 Medicago truncatula HOM05D000092 ORTHO05D000042 3.8e-13 79.3 203 28.6
Potri.013G015900 Populus trichocarpa HOM05D000092 ORTHO05D000042 5.0e-13 79.0 208 30.3
Potri.013G015700 Populus trichocarpa HOM05D000092 ORTHO05D000042 6.5e-13 78.6 208 30.3
Gohir.D11G325101 Gossypium hirsutum HOM05D000092 ORTHO05D000042 8.5e-13 78.2 181 28.7
COL.COLO4_37555 Corchorus olitorius HOM05D000092 ORTHO05D000042 1.1e-12 77.8 204 28.4
Medtr1g037250 Medicago truncatula HOM05D000092 ORTHO05D000042 1.4e-12 77.4 216 26.4
Medtr1g041550 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-12 77.0 210 29.5
Manes.10G028400 Manihot esculenta HOM05D000092 ORTHO05D000042 2.5e-12 76.6 214 31.8
Medtr0006s0080 Medicago truncatula HOM05D000092 ORTHO05D000042 2.5e-12 76.6 220 27.7
Medtr1g044020 Medicago truncatula HOM05D000092 ORTHO05D000042 4.2e-12 75.9 214 29.4
Thecc.05G225000 Theobroma cacao HOM05D000092 ORTHO05D000042 4.2e-12 75.9 194 27.3
Medtr1g036750 Medicago truncatula HOM05D000092 ORTHO05D000042 5.5e-12 75.5 212 28.3
TPR.G409 Trifolium pratense HOM05D000092 ORTHO05D000042 5.5e-12 75.5 204 31.4
Gorai.007G356000 Gossypium raimondii HOM05D000092 ORTHO05D000042 7.2e-12 75.1 184 28.3
Medtr0069s0080 Medicago truncatula HOM05D000092 ORTHO05D000042 9.4e-12 74.7 207 28.5
Medtr1g037010 Medicago truncatula HOM05D000092 ORTHO05D000042 9.4e-12 74.7 200 29.5
Medtr2g089975 Medicago truncatula HOM05D000092 ORTHO05D000042 9.4e-12 74.7 210 29.5
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 2.7e-11 73.2 197 27.9
TPR.G16791 Trifolium pratense HOM05D000092 ORTHO05D000042 3.6e-11 72.8 210 26.2
Medtr0006s0240 Medicago truncatula HOM05D000092 ORTHO05D000042 4.7e-11 72.4 216 27.3
Medtr1g051625 Medicago truncatula HOM05D000092 ORTHO05D000042 4.7e-11 72.4 219 26.0
TPR.G40261 Trifolium pratense HOM05D000092 ORTHO05D000042 4.7e-11 72.4 209 29.7
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 6.1e-11 72.0 185 28.6
Thecc.05G202500 Theobroma cacao HOM05D000092 ORTHO05D000042 7.9e-11 71.6 187 28.9
Thecc.05G245100 Theobroma cacao HOM05D000092 ORTHO05D000042 7.9e-11 71.6 202 28.7
Medtr0069s0090 Medicago truncatula HOM05D000092 ORTHO05D000042 1.0e-10 71.2 186 29.6
Medtr1g036820 Medicago truncatula HOM05D000092 ORTHO05D000042 1.0e-10 71.2 162 30.2
Solyc04g005540.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 1.0e-10 71.2 229 25.8
Sabra13G0018200 Salix brachista HOM05D000092 ORTHO05D000042 2.3e-10 70.1 209 28.7
Manes.08G163511 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-10 69.7 222 24.8
arahy.Tifrunner.gnm1.ann1.6L3BCE Arachis hypogaea HOM05D000092 ORTHO05D000042 3.9e-10 69.3 214 28.0
Duzib177G0454 Durio zibethinus HOM05D000092 ORTHO05D000042 3.9e-10 69.3 210 26.2
Medtr1g442750 Medicago truncatula HOM05D000092 ORTHO05D000042 3.9e-10 69.3 203 27.6
Manes.07G062388 Manihot esculenta HOM05D000092 ORTHO05D000042 5.1e-10 68.9 183 30.6
Sopen04g001560 Solanum pennellii HOM05D000092 ORTHO05D000042 6.7e-10 68.6 229 25.3
Thecc.09G244900 Theobroma cacao HOM05D000092 ORTHO05D000042 8.8e-10 68.2 205 27.3
Gohir.A10G241400 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.5e-09 67.4 197 26.9
Gohir.D11G326000 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.5e-09 67.4 197 27.4
Atru.chr1.1013 Acer truncatum HOM05D000092 ORTHO05D000042 2.6e-09 66.6 241 25.7
Sabra13G0014100 Salix brachista HOM05D000092 ORTHO05D000042 3.3e-09 66.2 209 27.8
COL.COLO4_13571 Corchorus olitorius HOM05D000092 ORTHO05D000042 4.4e-09 65.9 183 29.5
Gorai.007G356800 Gossypium raimondii HOM05D000092 ORTHO05D000042 4.4e-09 65.9 197 27.9
Gohir.A11G260000 Gossypium hirsutum HOM05D000092 ORTHO05D000042 7.4e-09 65.1 185 28.1
Atru.chr1.979 Acer truncatum HOM05D000092 ORTHO05D000042 1.3e-08 64.3 241 25.3
Duzib177G0334 Durio zibethinus HOM05D000092 ORTHO05D000042 1.3e-08 64.3 238 26.5
Medtr1g050402 Medicago truncatula HOM05D000092 ORTHO05D000042 1.3e-08 64.3 205 28.3
Haze_04284 Corylus avellana HOM05D000092 ORTHO05D000042 1.7e-08 63.9 195 29.7
TPR.G13805 Trifolium pratense HOM05D000092 ORTHO05D000042 1.7e-08 63.9 208 27.9
Duzib177G0387 Durio zibethinus HOM05D000092 ORTHO05D000042 2.2e-08 63.5 212 27.8
Solyc12g044190.3 Solanum lycopersicum HOM05D000092 ORTHO05D000042 2.2e-08 63.5 190 26.3
Manes.02G215425 Manihot esculenta HOM05D000092 ORTHO05D000042 2.8e-08 63.2 205 28.3
TPR.G13790 Trifolium pratense HOM05D000092 ORTHO05D000042 2.8e-08 63.2 207 25.6
TPR.G18289 Trifolium pratense HOM05D000092 ORTHO05D000042 2.8e-08 63.2 208 27.4
Gorai.007G290300 Gossypium raimondii HOM05D000092 ORTHO05D000042 3.7e-08 62.8 184 29.3
Manes.02G215700 Manihot esculenta HOM05D000092 ORTHO05D000042 4.8e-08 62.4 197 27.9
Manes.02G215400 Manihot esculenta HOM05D000092 ORTHO05D000042 6.3e-08 62.0 195 28.2
Manes.02G215420 Manihot esculenta HOM05D000092 ORTHO05D000042 6.3e-08 62.0 195 28.2
Manes.02G215445 Manihot esculenta HOM05D000092 ORTHO05D000042 6.3e-08 62.0 195 29.2
Sabra13G0019000 Salix brachista HOM05D000092 ORTHO05D000042 6.3e-08 62.0 186 26.9
Thecc.05G224600 Theobroma cacao HOM05D000092 ORTHO05D000042 6.3e-08 62.0 192 24.5
Thecc.05G225500 Theobroma cacao HOM05D000092 ORTHO05D000042 6.3e-08 62.0 194 27.3
Sopen12g022450 Solanum pennellii HOM05D000092 ORTHO05D000042 8.2e-08 61.6 194 28.9
Gorai.007G356300 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.1e-07 61.2 106 35.8
Manes.02G215120 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-07 61.2 196 27.6
TPR.G25268 Trifolium pratense HOM05D000092 ORTHO05D000042 1.4e-07 60.8 204 29.4
TPR.G25280 Trifolium pratense HOM05D000092 ORTHO05D000042 1.4e-07 60.8 206 29.6
Manes.02G215430 Manihot esculenta HOM05D000092 ORTHO05D000042 1.8e-07 60.5 195 27.7
Gohir.D10G253700 Gossypium hirsutum HOM05D000092 ORTHO05D000042 2.4e-07 60.1 199 24.1
Sabra13G0015000 Salix brachista HOM05D000092 ORTHO05D000042 2.4e-07 60.1 188 25.0
Sabra13G0015300 Salix brachista HOM05D000092 ORTHO05D000042 2.4e-07 60.1 201 25.9
Sabra13G0019200 Salix brachista HOM05D000092 ORTHO05D000042 2.4e-07 60.1 188 25.0
Duzib177G0617 Durio zibethinus HOM05D000092 ORTHO05D000042 3.1e-07 59.7 209 24.4
Phvul.010G104500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 3.1e-07 59.7 210 29.0
Manes.02G215000 Manihot esculenta HOM05D000092 ORTHO05D000042 4.1e-07 59.3 195 27.7
QL03p002643 Quercus lobata HOM05D000092 ORTHO05D000042 4.1e-07 59.3 205 25.9
Sabra13G0019600 Salix brachista HOM05D000092 ORTHO05D000042 4.1e-07 59.3 187 24.6
Duzib192G0626 Durio zibethinus HOM05D000092 ORTHO05D000042 5.3e-07 58.9 191 27.2
GSVIVG01036191001 Vitis vinifera HOM05D000092 ORTHO05D000042 5.3e-07 58.9 216 25.9
Gorai.011G263500 Gossypium raimondii HOM05D000092 ORTHO05D000042 7.0e-07 58.5 198 23.7
Thecc.K0004100 Theobroma cacao HOM05D000092 ORTHO05D000042 7.0e-07 58.5 198 26.8
arahy.Tifrunner.gnm1.ann1.G6K2RS Arachis hypogaea HOM05D000092 ORTHO05D000042 9.1e-07 58.2 171 26.3
arahy.Tifrunner.gnm1.ann1.RR24AQ Arachis hypogaea HOM05D000092 ORTHO05D000042 9.1e-07 58.2 211 25.6
COL.COLO4_13577 Corchorus olitorius HOM05D000092 ORTHO05D000042 9.1e-07 58.2 207 23.7
Sabra13G0018000 Salix brachista HOM05D000092 ORTHO05D000042 9.1e-07 58.2 188 25.0
arahy.Tifrunner.gnm1.ann1.WVKR3X Arachis hypogaea HOM05D000092 ORTHO05D000042 1.2e-06 57.8 200 27.5
Haze_23738 Corylus avellana HOM05D000092 ORTHO05D000042 1.2e-06 57.8 215 24.2
Sabra13G0019500 Salix brachista HOM05D000092 ORTHO05D000042 1.2e-06 57.8 188 25.0
Thecc.05G202700 Theobroma cacao HOM05D000092 ORTHO05D000042 1.2e-06 57.8 198 27.3
arahy.Tifrunner.gnm1.ann1.8I7GER Arachis hypogaea HOM05D000092 ORTHO05D000042 1.5e-06 57.4 169 26.6
Manes.02G215405 Manihot esculenta HOM05D000092 ORTHO05D000042 2.0e-06 57.0 205 26.3
Medtr1g036580 Medicago truncatula HOM05D000092 ORTHO05D000042 2.0e-06 57.0 154 28.6
Sabra13G0013800 Salix brachista HOM05D000092 ORTHO05D000042 2.0e-06 57.0 188 25.0
COL.COLO4_32819 Corchorus olitorius HOM05D000092 ORTHO05D000042 2.6e-06 56.6 208 26.4
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-06 56.6 220 26.4
Potri.019G036875 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.6e-06 56.6 217 26.7
arahy.Tifrunner.gnm1.ann1.IBP7G5 Arachis hypogaea HOM05D000092 ORTHO05D000042 3.5e-06 56.2 197 25.9
arahy.Tifrunner.gnm1.ann1.LSW4XK Arachis hypogaea HOM05D000092 ORTHO05D000042 3.5e-06 56.2 217 24.0
Duzib177G0159 Durio zibethinus HOM05D000092 ORTHO05D000042 3.5e-06 56.2 217 24.9
ECA247G1818 Erigeron canadensis HOM05D000092 ORTHO05D000042 4.5e-06 55.8 197 27.4
Gohir.D11G325233 Gossypium hirsutum HOM05D000092 ORTHO05D000042 4.5e-06 55.8 198 27.3
arahy.Tifrunner.gnm1.ann1.DGMY7Y Arachis hypogaea HOM05D000092 ORTHO05D000042 5.9e-06 55.5 210 22.9
Manes.02G220660 Manihot esculenta HOM05D000092 ORTHO05D000042 5.9e-06 55.5 185 29.2
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 5.9e-06 55.5 213 24.4
Medtr1g044095 Medicago truncatula HOM05D000092 ORTHO05D000042 7.7e-06 55.1 175 25.7
Nn5g27601 Nelumbo nucifera HOM05D000092 ORTHO05D000042 7.7e-06 55.1 232 27.6


User provided reference genes

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