Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 9.3e-139 496.9 254 100.0
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.9e-67 260.0 165 83.0
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 5.5e-67 258.5 165 81.8
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.7e-66 256.1 165 80.6
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 8.0e-66 254.6 165 80.6
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 8.0e-66 254.6 165 80.6
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 8.0e-66 254.6 165 80.6
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 1.4e-65 253.8 167 79.6
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 1.8e-65 253.4 165 80.6
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.8e-65 253.4 165 79.4
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 2.3e-65 253.1 165 80.6
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 2.0e-64 250.0 165 77.6
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 1.7e-63 246.9 165 78.2
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 2.8e-63 246.1 164 79.9
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 8.3e-63 244.6 165 78.2
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 8.3e-63 244.6 165 77.6
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.1e-62 244.2 165 79.4
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.1e-62 244.2 163 81.0
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.1e-62 244.2 165 78.2
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 1.4e-62 243.8 165 76.4
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.4e-62 243.8 165 77.6
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 1.4e-62 243.8 165 77.6
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 1.8e-62 243.4 165 77.6
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.8e-62 243.4 165 77.6
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.8e-62 243.4 165 77.6
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 2.4e-62 243.0 165 77.6
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 4.1e-62 242.3 165 75.8
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.6e-61 240.4 165 77.6
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 2.7e-61 239.6 165 75.2
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 2.7e-61 239.6 165 75.2
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 2.7e-61 239.6 165 74.5
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 5.9e-61 238.4 165 74.5
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 7.7e-61 238.0 165 77.0
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.0e-60 237.7 165 76.4
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.0e-60 237.7 165 76.4
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 1.3e-60 237.3 165 77.0
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 2.3e-60 236.5 165 77.0
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 2.3e-60 236.5 221 62.9
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 3.8e-60 235.7 165 75.2
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 6.6e-60 235.0 165 76.4
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 1.1e-59 234.2 165 77.0
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 3.3e-59 232.6 151 81.5
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 3.3e-59 232.6 178 70.8
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 5.6e-59 231.9 165 75.2
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 9.5e-59 231.1 165 72.7
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 9.5e-59 231.1 165 73.9
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.6e-58 230.3 164 76.2
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 2.1e-58 229.9 165 75.8
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 2.8e-58 229.6 165 74.5
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 4.7e-58 228.8 165 74.5
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.4e-57 227.3 165 72.7
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.2e-56 224.2 165 72.1
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 1.2e-56 224.2 165 72.1
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 4.4e-56 222.2 165 69.1
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.3e-55 220.7 165 68.5
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 1.3e-55 220.7 190 65.8
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 1.7e-55 220.3 165 71.5
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 1.7e-55 220.3 165 70.9
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 2.9e-55 219.5 167 70.7
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 3.7e-55 219.2 165 70.3
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 4.9e-55 218.8 165 72.1
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.8e-54 216.9 165 68.5
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 2.4e-54 216.5 165 69.1
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 3.2e-54 216.1 178 65.7
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 4.1e-54 215.7 188 62.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 1.6e-53 213.8 165 68.5
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 7.8e-53 211.5 165 67.3
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 1.0e-52 211.1 165 67.3
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.0e-52 211.1 165 66.7
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 2.3e-52 209.9 165 67.3
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 8.6e-52 208.0 165 66.7
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 5.6e-51 205.3 165 66.1
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 5.6e-51 205.3 165 66.7
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 9.5e-51 204.5 165 67.3
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 2.1e-50 203.4 165 68.5
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 6.2e-50 201.8 165 63.6
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 8.0e-50 201.4 188 60.1
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 8.0e-50 201.4 188 60.1
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 1.0e-49 201.1 158 66.5
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 4.0e-49 199.1 165 64.8
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 4.0e-49 199.1 165 64.8
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.2e-48 197.6 190 56.8
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 5.8e-48 195.3 133 74.4
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 9.8e-48 194.5 130 79.2
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 2.2e-47 193.4 188 58.5
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 2.2e-47 193.4 171 64.3
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 2.9e-47 193.0 188 58.5
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 2.9e-47 193.0 188 58.5
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 8.3e-47 191.4 165 65.5
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 9.2e-46 188.0 166 62.7
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 9.2e-46 188.0 132 75.8
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 1.9e-43 180.3 131 71.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 2.1e-42 176.8 165 57.0
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 3.7e-39 166.0 186 57.0
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 8.3e-39 164.9 167 52.7
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 4.1e-38 162.5 125 68.8
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 1.6e-34 150.6 157 55.4
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 3.6e-34 149.4 164 49.4
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 1.4e-33 147.5 164 48.2
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 1.8e-33 147.1 135 57.0
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 6.4e-31 138.7 137 56.2
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 7.8e-29 131.7 130 57.7
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.3e-28 130.2 165 47.3
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 7.6e-24 115.2 166 41.6
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 9.9e-24 114.8 144 45.1
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 9.9e-24 114.8 81 71.6
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.3e-19 99.8 97 61.9
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 5.6e-19 99.0 94 62.8
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 8.1e-18 95.1 58 77.6
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.4e-17 93.6 90 65.6
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 1.3e-10 71.2 47 76.6
CBR_g17833 Chara braunii HOM05D006229 ORTHO05D007190 7.6e-08 62.0 74 45.9
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 3.8e-07 59.7 32 78.1


User provided reference genes

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