Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 7.7e-158 560.5 288 100.0
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 9.2e-127 457.2 285 81.4
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.6e-126 456.4 283 83.7
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 2.3e-125 452.6 288 80.9
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 2.3e-125 452.6 292 78.8
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 5.6e-124 448.0 279 81.0
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 4.0e-122 441.8 286 79.7
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 6.8e-122 441.0 282 78.4
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 6.8e-122 441.0 278 79.5
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 7.6e-121 437.6 286 77.3
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.1e-119 433.7 287 78.0
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 1.4e-119 433.3 289 76.5
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 4.1e-119 431.8 295 73.9
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 4.1e-119 431.8 283 77.7
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 7.8e-118 427.6 289 75.8
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.3e-117 426.8 304 73.0
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 5.1e-117 424.9 286 77.3
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 6.6e-117 424.5 288 75.3
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.6e-115 419.9 289 74.4
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 1.6e-115 419.9 286 74.8
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 2.8e-115 419.1 287 74.9
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 3.6e-115 418.7 337 66.5
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 5.2e-114 414.8 286 74.5
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 1.2e-113 413.7 280 76.1
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 7.6e-113 411.0 286 73.4
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 4.9e-112 408.3 288 73.3
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 4.2e-111 405.2 279 73.1
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 5.4e-111 404.8 277 74.4
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 1.6e-110 403.3 286 72.4
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 2.7e-110 402.5 278 74.1
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 2.7e-110 402.5 279 73.8
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 1.7e-109 399.8 288 71.9
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 2.3e-109 399.4 282 73.0
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 5.1e-109 398.3 287 72.1
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 8.7e-109 397.5 282 70.9
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.5e-108 396.0 253 77.5
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 1.3e-107 393.7 283 71.4
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 1.3e-107 393.7 293 68.6
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 1.1e-106 390.6 307 68.4
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 1.1e-106 390.6 286 71.3
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 1.4e-106 390.2 277 70.8
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 2.4e-106 389.4 283 68.9
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 4.0e-106 388.7 255 76.9
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 4.0e-106 388.7 292 67.1
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 4.0e-106 388.7 292 67.1
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 5.3e-106 388.3 285 68.4
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 9.0e-106 387.5 292 67.5
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 1.5e-105 386.7 283 68.6
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 2.0e-105 386.3 284 71.5
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 2.6e-105 386.0 257 77.0
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 2.6e-105 386.0 270 71.1
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 5.8e-105 384.8 251 73.3
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 9.9e-105 384.0 263 73.4
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 2.2e-104 382.9 257 74.7
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 1.1e-103 380.6 286 67.1
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 1.1e-103 380.6 306 65.4
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 7.1e-103 377.9 314 64.6
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 1.2e-102 377.1 293 65.5
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 6.0e-102 374.8 288 69.4
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 6.0e-102 374.8 289 68.5
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 1.0e-101 374.0 276 71.4
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 2.3e-101 372.9 304 64.8
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 3.0e-101 372.5 253 71.5
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 5.1e-101 371.7 261 72.0
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 6.6e-101 371.3 233 78.5
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.1e-100 370.5 271 68.6
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 7.4e-100 367.9 302 63.6
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 7.4e-100 367.9 285 66.0
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 9.6e-100 367.5 282 66.7
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 2.1e-99 366.3 231 77.1
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 1.8e-98 363.2 293 64.8
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 1.8e-98 363.2 279 68.1
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 1.8e-98 363.2 228 78.1
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 5.3e-98 361.7 303 63.4
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 2.6e-97 359.4 303 62.7
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 1.3e-96 357.1 296 63.9
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 4.2e-95 352.1 230 74.8
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 9.3e-95 350.9 230 74.3
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 1.9e-92 343.2 271 62.7
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.6e-91 340.1 230 71.3
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 1.8e-90 336.7 255 68.2
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 1.2e-89 334.0 239 71.1
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 1.5e-89 333.6 203 81.8
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 7.6e-89 331.3 284 59.2
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 1.8e-85 320.1 217 72.4
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 3.0e-85 319.3 217 74.7
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 2.9e-80 302.8 203 75.9
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 7.2e-79 298.1 205 73.2
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 1.6e-78 297.0 205 71.7
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 3.6e-78 295.8 268 61.9
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 5.7e-76 288.5 199 70.9
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 4.1e-74 282.3 183 72.7
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 2.2e-72 276.6 245 56.3
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 2.2e-72 276.6 211 72.5
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 5.0e-72 275.4 285 55.4
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 7.2e-71 271.6 283 53.0
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.7e-67 260.4 249 52.6
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 3.7e-67 259.2 207 65.7
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 8.2e-67 258.1 275 49.8
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 2.7e-62 243.0 245 52.2
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.9e-61 239.2 165 72.7
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 1.5e-60 237.3 249 49.0
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 1.0e-56 224.6 287 51.2
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 3.3e-52 209.5 134 76.9
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.7e-35 154.1 111 70.3
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 1.3e-32 144.4 170 48.2
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 5.4e-26 122.5 99 61.6
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.3e-24 117.9 99 60.6
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 1.7e-24 117.5 299 32.4
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 6.8e-21 105.5 339 28.3
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 1.7e-16 90.9 247 32.8
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 1.5e-15 87.8 105 51.4
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 5.6e-15 85.9 102 52.0
Haze_10306 Corylus avellana HOM05D000031 ORTHO05D001033 1.7e-11 74.3 55 70.9
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 2.4e-10 70.5 39 79.5
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 5.4e-10 69.3 49 71.4
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 1.2e-09 68.2 254 23.6
Atru.chr5.1458 Acer truncatum HOM05D003798 ORTHO05D004652 3.9e-08 63.2 46 60.9
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 6.2e-06 55.8 58 48.3


User provided reference genes

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