Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 8.3e-185 650.2 324 100.0
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 7.8e-58 228.4 344 43.3
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 5.4e-51 205.7 346 40.8
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 6.0e-50 202.2 345 40.3
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.3e-32 142.9 377 31.8
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 3.5e-26 123.2 352 32.4
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 3.5e-26 123.2 381 31.5
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.1e-24 118.2 348 31.0
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 1.6e-23 114.4 356 28.7
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 2.8e-23 113.6 354 30.8
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 2.4e-22 110.5 195 39.5
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 2.0e-21 107.5 191 35.6
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 3.4e-21 106.7 359 28.4
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 4.5e-21 106.3 158 40.5
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 7.7e-21 105.5 137 44.5
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-19 100.9 344 27.6
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 1.9e-19 100.9 344 27.6
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 4.2e-19 99.8 365 29.3
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 5.5e-19 99.4 358 27.7
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.1e-18 97.4 379 27.4
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 3.0e-17 93.6 148 37.2
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 6.7e-17 92.4 386 28.5
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 2.0e-16 90.9 109 44.0
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 2.0e-16 90.9 368 27.7
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 3.3e-16 90.1 385 29.1
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 5.7e-16 89.4 153 36.6
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 7.4e-16 89.0 193 31.6
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 9.7e-16 88.6 360 25.6
Sc15g0005390 Simmondsia chinensis HOM05D006874 ORTHO05D008334 1.7e-15 87.8 179 37.4
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 2.2e-15 87.4 282 29.4
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 4.8e-15 86.3 112 42.9
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.1e-14 85.1 372 27.7
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 3.1e-14 83.6 363 24.0
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 4.1e-14 83.2 142 34.5
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 6.9e-14 82.4 169 32.5
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 9.1e-14 82.0 345 24.1
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-13 81.6 162 33.3
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.2e-13 81.6 365 27.7
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 1.5e-13 81.3 107 32.7
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 2.0e-13 80.9 354 28.0
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.6e-13 80.5 153 35.3
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 3.4e-13 80.1 354 26.3
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 7.7e-13 79.0 368 27.2
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 7.7e-13 79.0 167 34.1
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 1.0e-12 78.6 327 26.6
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.0e-12 78.6 345 26.1
Ciclev10030239m.g Citrus clementina HOM05D006874 ORTHO05D008334 1.7e-12 77.8 139 34.5
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.7e-12 77.8 346 26.3
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 1.7e-12 77.8 166 34.9
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 2.2e-12 77.4 326 28.8
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.9e-12 77.0 347 25.9
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 5.0e-12 76.3 251 26.3
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 5.0e-12 76.3 382 27.5
Actinidia00356 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.4e-11 74.7 165 34.5
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 1.4e-11 74.7 143 34.3
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.4e-11 74.7 339 24.8
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 2.5e-11 73.9 344 25.0
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.5e-11 73.9 153 35.9
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 3.2e-11 73.6 166 33.1
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 3.2e-11 73.6 168 33.3
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 5.5e-11 72.8 358 28.5
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 7.2e-11 72.4 143 34.3
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 7.2e-11 72.4 378 24.1
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 9.4e-11 72.0 209 31.6
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 9.4e-11 72.0 190 28.9
Thecc.02G119800 Theobroma cacao HOM05D016697 ORTHO05D018163 9.4e-11 72.0 354 23.4
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 1.2e-10 71.6 190 28.9
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 1.6e-10 71.2 190 28.9
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 3.6e-10 70.1 109 35.8
Cpa.g.sc91.58 Carica papaya HOM05D016697 ORTHO05D018163 6.1e-10 69.3 373 20.4
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 7.9e-10 68.9 355 21.7
SalBow7G3254 Salvia bowleyana HOM05D006874 ORTHO05D008334 1.8e-09 67.8 106 34.9
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 2.3e-09 67.4 113 37.2
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 3.9e-09 66.6 144 30.6
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 3.9e-09 66.6 343 25.4
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 3.9e-09 66.6 160 28.1
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 5.1e-09 66.2 110 29.1
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 5.1e-09 66.2 145 32.4
SGA_v2.0_scaffold14G07085 Striga asiatica HOM05D000285 ORTHO05D000241 5.1e-09 66.2 115 31.3
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 6.7e-09 65.9 303 26.1
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 6.7e-09 65.9 321 28.0
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 8.8e-09 65.5 145 33.1
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 1.5e-08 64.7 346 24.6
Nitab4.5_0001426g0040 Nicotiana tabacum HOM05D006874 ORTHO05D008334 1.5e-08 64.7 349 21.5
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 3.3e-08 63.5 150 29.3
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 4.4e-08 63.2 112 30.4
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 4.4e-08 63.2 150 30.0
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 1.3e-07 61.6 279 25.1
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.7e-07 61.2 347 24.2
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 3.7e-07 60.1 118 33.1
CDE02G2198 Ceratophyllum demersum HOM05D006874 ORTHO05D008334 4.8e-07 59.7 99 37.4
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 6.3e-07 59.3 148 29.7
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 6.3e-07 59.3 143 30.1
COL.COLO4_32486 Corchorus olitorius HOM05D016697 ORTHO05D018163 1.1e-06 58.5 354 25.1
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.4e-06 58.2 122 32.0
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 1.4e-06 58.2 334 24.3
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 1.8e-06 57.8 197 26.9
Nitab4.5_0002796g0010 Nicotiana tabacum HOM05D006874 ORTHO05D008334 5.3e-06 56.2 110 30.0
Dinv16069 Davidia involucrata HOM05D006874 ORTHO05D008334 9.1e-06 55.5 67 44.8


User provided reference genes

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