Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G054200 Manihot esculenta HOM05D002412 ORTHO05D002516 1.8e-49 199.9 197 100.0
Manes.10G084600 Manihot esculenta HOM05D002412 ORTHO05D002516 1.1e-25 120.9 202 60.9
TWI59G0380 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.7e-15 87.0 208 42.3
QL11p029982 Quercus lobata HOM05D002412 ORTHO05D002516 3.8e-15 85.9 203 38.4
Prupe.8G147000 Prunus persica HOM05D002412 ORTHO05D002516 9.4e-14 81.3 207 38.2
GSVIVG01037808001 Vitis vinifera HOM05D002412 ORTHO05D002516 9.4e-14 81.3 200 33.5
TWI14G1286 Tripterygium wilfordii HOM05D002412 ORTHO05D002516 1.0e-12 77.8 202 47.0
RcHm_v2.0_Chr6g0252561 Rosa chinensis HOM05D002412 ORTHO05D002516 1.8e-12 77.0 202 47.5
FAN24G3376 Fragaria x ananassa HOM05D002412 ORTHO05D002516 3.3e-11 72.8 200 49.5
CsaV3_4G000130 Cucumis sativus L. HOM05D002412 ORTHO05D002516 4.4e-11 72.4 196 35.2
Potri.001G292100 Populus trichocarpa HOM05D002412 ORTHO05D002516 4.4e-11 72.4 208 36.1
ClCG10G010090 Citrullus lanatus HOM05D002412 ORTHO05D002516 5.7e-11 72.0 196 37.2
Cfa004671 Carpinus fangiana HOM05D002412 ORTHO05D002516 2.2e-10 70.1 205 29.8
FAN15G1641 Fragaria x ananassa HOM05D002412 ORTHO05D002516 2.2e-10 70.1 197 43.1
Thecc.02G118800 Theobroma cacao HOM05D002412 ORTHO05D002516 2.2e-10 70.1 200 32.5
Peaxi162Scf00016g03017 Petunia axillaris HOM05D002412 ORTHO05D002516 6.3e-10 68.6 75 52.0
Ciclev10029343m.g Citrus clementina HOM05D002412 ORTHO05D002516 8.2e-10 68.2 73 56.2
Hma1.2p1_1059F.1_g253110 Hydrangea macrophylla HOM05D002412 ORTHO05D002516 8.2e-10 68.2 194 30.9
Nitab4.5_0007781g0010 Nicotiana tabacum HOM05D002412 ORTHO05D002516 1.8e-09 67.0 75 50.7
THA.LOC104807210 Tarenaya hassleriana HOM05D002412 ORTHO05D002516 2.4e-09 66.6 196 30.6
FvH4_2g03590 Fragaria vesca HOM05D002412 ORTHO05D002516 3.1e-09 66.2 195 49.2
Actinidia00360 Actinidia chinensis HOM05D002412 ORTHO05D002516 4.1e-09 65.9 198 30.8
Dinv42242 Davidia involucrata HOM05D002412 ORTHO05D002516 4.1e-09 65.9 195 31.3
Duzib052G0953 Durio zibethinus HOM05D002412 ORTHO05D002516 5.3e-09 65.5 198 30.8
CiPaw.06G164900 Carya illinoinensis HOM05D002412 ORTHO05D002516 9.1e-09 64.7 201 33.3
Sed0020406 Sechium edule HOM05D002412 ORTHO05D002516 9.1e-09 64.7 196 35.7
FAN20G0615 Fragaria x ananassa HOM05D002412 ORTHO05D002516 1.2e-08 64.3 197 43.1
MD05G1102500 Malus domestica HOM05D002412 ORTHO05D002516 2.0e-08 63.5 208 41.8
CAN.G606.66 Capsicum annuum HOM05D002412 ORTHO05D002516 2.6e-08 63.2 194 35.6
Nitab4.5_0002040g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 3.5e-08 62.8 192 32.8
Sabra16G0182100 Salix brachista HOM05D002412 ORTHO05D002516 3.5e-08 62.8 201 34.8
Haze_10271 Corylus avellana HOM05D002412 ORTHO05D002516 4.5e-08 62.4 197 33.0
MELO3C018019.2 Cucumis melo HOM05D002412 ORTHO05D002516 5.9e-08 62.0 194 31.4
Sed0010289 Sechium edule HOM05D002412 ORTHO05D002516 5.9e-08 62.0 197 29.9
MD10G1108100 Malus domestica HOM05D002412 ORTHO05D002516 2.2e-07 60.1 209 44.0
Solyc01g106910.4 Solanum lycopersicum HOM05D002412 ORTHO05D002516 2.9e-07 59.7 78 46.2
Sabra09G0066300 Salix brachista HOM05D002412 ORTHO05D002516 3.8e-07 59.3 192 35.9
Sopen01g049190 Solanum pennellii HOM05D002412 ORTHO05D002516 3.8e-07 59.3 76 44.7
Glyma.11G002100 Glycine max HOM05D002412 ORTHO05D002516 5.0e-07 58.9 199 27.6
MSTRG.16674 Avicennia marina HOM05D002412 ORTHO05D002516 6.5e-07 58.5 73 49.3
Lj9A329T24 Lonicera japonica HOM05D002412 ORTHO05D002516 8.5e-07 58.2 198 27.8
Lj9A332T16 Lonicera japonica HOM05D002412 ORTHO05D002516 8.5e-07 58.2 198 27.8
Oeu037285.1 Olea europaea HOM05D002412 ORTHO05D002516 8.5e-07 58.2 74 48.6
PGSC0003DMG400025836 Solanum tuberosum HOM05D002412 ORTHO05D002516 1.1e-06 57.8 77 45.5
Glyma.10G256100 Glycine max HOM05D002412 ORTHO05D002516 1.9e-06 57.0 201 28.9
vmacro19537 Vaccinium macrocarpon HOM05D002412 ORTHO05D002516 3.2e-06 56.2 199 29.1
Nitab4.5_0001185g0040 Nicotiana tabacum HOM05D002412 ORTHO05D002516 4.2e-06 55.8 75 46.7
Duzib132G0526 Durio zibethinus HOM05D002412 ORTHO05D002516 7.2e-06 55.1 30 80.0
Nitab4.5_0001458g0070 Nicotiana tabacum HOM05D002412 ORTHO05D002516 9.4e-06 54.7 195 31.3
Rhsim05G0092300 Rhododendron simsii HOM05D002412 ORTHO05D002516 9.4e-06 54.7 191 31.9


User provided reference genes

Program Settings