Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 5.1e-237 823.9 393 100.0
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.2e-190 669.8 381 84.5
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 3.4e-188 661.8 393 81.9
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.3e-187 659.8 392 82.4
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 8.3e-187 657.1 393 80.2
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 5.4e-186 654.4 397 80.4
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 7.0e-186 654.1 350 84.6
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 2.0e-185 652.5 400 78.8
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 3.5e-185 651.7 382 82.5
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 2.9e-184 648.7 403 78.4
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 3.8e-184 648.3 385 80.3
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 5.0e-184 647.9 390 80.8
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 4.3e-183 644.8 383 79.9
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 5.6e-183 644.4 376 80.6
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 1.6e-182 642.9 406 76.6
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 1.6e-182 642.9 349 84.2
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.6e-182 642.9 392 78.6
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 2.1e-182 642.5 382 80.9
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.8e-182 642.1 392 78.3
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 8.0e-182 640.6 327 89.6
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 1.4e-181 639.8 391 78.3
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.8e-181 639.4 382 78.8
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 3.0e-181 638.6 391 79.0
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 3.0e-181 638.6 412 74.3
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 2.6e-180 635.6 396 78.3
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.7e-179 632.9 386 78.0
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 6.4e-179 630.9 343 84.5
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 6.4e-179 630.9 382 80.1
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 6.4e-179 630.9 390 76.9
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 2.4e-178 629.0 390 77.4
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 3.2e-178 628.6 352 82.7
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 4.1e-178 628.2 398 77.1
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 5.4e-178 627.9 386 77.5
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 1.6e-177 626.3 396 75.0
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.9e-177 624.4 382 77.7
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 7.8e-177 624.0 328 88.1
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.0e-176 623.6 350 83.7
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.0e-176 623.6 398 75.6
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.0e-176 623.6 398 75.6
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 3.9e-176 621.7 383 77.3
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 5.0e-176 621.3 377 78.8
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 8.6e-176 620.5 395 75.9
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.1e-175 620.2 394 74.9
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 1.5e-175 619.8 370 78.9
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.9e-175 619.4 381 78.7
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 3.3e-175 618.6 328 86.9
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 4.3e-175 618.2 370 78.9
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 7.3e-175 617.5 336 83.6
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 7.3e-175 617.5 394 76.1
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 9.5e-175 617.1 336 83.9
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.3e-173 612.5 409 73.1
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 8.9e-173 610.5 363 79.1
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 2.6e-172 609.0 335 82.7
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.6e-172 609.0 327 84.7
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 5.8e-172 607.8 322 86.0
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 9.8e-172 607.1 317 86.4
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 9.8e-172 607.1 389 74.8
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 1.1e-170 603.6 335 82.4
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 2.4e-170 602.4 384 76.0
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 3.2e-170 602.1 321 84.1
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 3.2e-170 602.1 384 74.7
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 3.2e-170 602.1 384 74.7
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 4.1e-170 601.7 315 86.3
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 7.0e-170 600.9 326 84.4
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 7.0e-170 600.9 391 73.9
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 2.0e-169 599.4 355 80.0
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 2.7e-169 599.0 373 77.5
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 7.8e-169 597.4 394 71.8
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 7.8e-169 597.4 351 79.5
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.5e-167 592.4 332 81.6
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 3.3e-167 592.0 321 82.6
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 9.5e-167 590.5 328 82.9
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 9.5e-167 590.5 315 84.1
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 1.6e-166 589.7 315 84.1
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 3.6e-166 588.6 315 84.1
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 3.6e-166 588.6 315 84.1
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.8e-165 586.3 349 78.5
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 4.4e-164 581.6 330 80.6
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 9.8e-164 580.5 315 82.5
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 4.1e-162 575.1 344 77.0
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 5.4e-162 574.7 406 70.4
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 1.6e-161 573.2 326 78.5
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 1.7e-160 569.7 378 73.8
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 5.1e-160 568.2 362 73.5
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 8.1e-158 560.8 297 84.2
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 4.4e-156 555.1 332 76.8
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 5.8e-156 554.7 348 76.4
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 6.0e-153 544.7 285 84.2
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 7.3e-151 537.7 358 71.8
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 2.0e-148 529.6 300 79.0
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 2.7e-145 519.2 629 49.0
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.9e-144 515.4 319 74.6
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 5.3e-141 505.0 315 70.2
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.2e-140 503.8 311 72.3
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 6.4e-139 498.0 317 70.3
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 5.4e-138 495.0 313 69.3
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.8e-128 463.4 325 65.2
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 5.3e-125 451.8 248 82.7
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 6.3e-110 401.7 272 71.0
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.3e-103 379.4 278 66.2
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 2.8e-102 376.3 263 69.2
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 6.3e-102 375.2 224 79.5
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.2e-89 334.3 344 46.5
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.2e-82 309.7 309 47.2
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.2e-81 307.8 310 47.7
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 5.2e-80 302.4 350 41.4
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.7e-76 290.0 163 81.6
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 1.1e-58 231.5 183 58.5
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.1e-56 224.9 126 77.8
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.4e-56 224.6 331 39.9
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.2e-55 221.5 189 58.2
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 4.3e-50 203.0 204 53.4
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 9.5e-50 201.8 129 72.9
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 5.8e-47 192.6 196 46.4
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 4.0e-32 143.3 84 75.0
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 5.8e-23 112.8 71 73.2
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.1e-17 92.4 79 53.2
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 3.5e-12 77.0 62 61.3
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 3.5e-12 77.0 39 79.5
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 1.4e-08 65.1 112 34.8
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 2.0e-07 61.2 32 71.9
Sed0004450 Sechium edule HOM05D000363 ORTHO05D000236 7.6e-07 59.3 129 31.0
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 1.7e-06 58.2 122 30.3
Migut.M01182 Erythranthe guttata HOM05D000363 ORTHO05D000236 8.4e-06 55.8 107 31.8
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.4e-06 55.8 93 37.6


User provided reference genes

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