Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G041500 Manihot esculenta HOM05D006528 ORTHO05D008117 2.7e-42 174.9 86 100.0
COL.COLO4_32404 Corchorus olitorius HOM05D006528 ORTHO05D008117 3.7e-39 164.5 85 94.1
Atru.chr6.1284 Acer truncatum HOM05D006528 ORTHO05D008117 7.0e-38 160.2 85 92.9
Ciclev10029672m.g Citrus clementina HOM05D006528 ORTHO05D008117 9.1e-38 159.8 82 95.1
Dinv16007 Davidia involucrata HOM05D006528 ORTHO05D008117 1.5e-37 159.1 85 92.9
Eucgr.I02615 Eucalyptus grandis HOM05D006528 ORTHO05D008117 5.9e-37 157.1 82 93.9
Thecc.02G128200 Theobroma cacao HOM05D006528 ORTHO05D008117 5.9e-37 157.1 85 92.9
Aqoxy6G00830 Aquilegia oxysepala HOM05D006528 ORTHO05D008117 7.7e-37 156.8 82 89.0
Aa31sc21G60 Aethionema arabicum HOM05D006528 ORTHO05D008117 3.8e-36 154.5 85 83.5
Rhsim11G0141900 Rhododendron simsii HOM05D006528 ORTHO05D008117 3.8e-36 154.5 85 89.4
Carub.0007s0679 Capsella rubella HOM05D006528 ORTHO05D008117 5.0e-36 154.1 84 85.7
CiPaw.05G028900 Carya illinoinensis HOM05D006528 ORTHO05D008117 5.0e-36 154.1 82 91.5
PSO541G2139 Papaver somniferum HOM05D006528 ORTHO05D008117 5.0e-36 154.1 82 90.2
PSO675G1859 Papaver somniferum HOM05D006528 ORTHO05D008117 5.0e-36 154.1 82 90.2
Potri.007G116400 Populus trichocarpa HOM05D006528 ORTHO05D008117 6.5e-36 153.7 85 89.4
Actinidia02398 Actinidia chinensis HOM05D006528 ORTHO05D008117 8.5e-36 153.3 82 92.7
CSS0011274 Camellia sinensis var. sinensis HOM05D006528 ORTHO05D008117 8.5e-36 153.3 84 91.7
Zm00001eb053530 Zea mays HOM05D006528 ORTHO05D008117 8.5e-36 153.3 85 88.2
Oeu027056.1 Olea europaea HOM05D006528 ORTHO05D008117 1.1e-35 152.9 85 89.4
TWI14G0454 Tripterygium wilfordii HOM05D006528 ORTHO05D008117 1.1e-35 152.9 82 89.0
Sabra07G0094700 Salix brachista HOM05D006528 ORTHO05D008117 1.4e-35 152.5 85 88.2
Cc02_g20840 Coffea canephora HOM05D006528 ORTHO05D008117 1.9e-35 152.1 82 92.7
Haze_10502 Corylus avellana HOM05D006528 ORTHO05D008117 2.5e-35 151.8 82 90.2
Duzib248G1107 Durio zibethinus HOM05D006528 ORTHO05D008117 3.2e-35 151.4 84 89.3
FvH4_2g11550 Fragaria vesca HOM05D006528 ORTHO05D008117 3.2e-35 151.4 85 87.1
FAN15G1663 Fragaria x ananassa HOM05D006528 ORTHO05D008117 3.2e-35 151.4 85 87.1
FAN24G2600 Fragaria x ananassa HOM05D006528 ORTHO05D008117 3.2e-35 151.4 85 87.1
FAN27G2089 Fragaria x ananassa HOM05D006528 ORTHO05D008117 3.2e-35 151.4 85 87.1
Lalb_Chr09g0326921 Lupinus albus HOM05D006528 ORTHO05D008117 3.2e-35 151.4 85 87.1
MD05G1048500 Malus domestica HOM05D006528 ORTHO05D008117 3.2e-35 151.4 85 87.1
RcHm_v2.0_Chr6g0270691 Rosa chinensis HOM05D006528 ORTHO05D008117 3.2e-35 151.4 85 87.1
Dinv24144 Davidia involucrata HOM05D006528 ORTHO05D008117 4.2e-35 151.0 80 93.8
MD10G1054900 Malus domestica HOM05D006528 ORTHO05D008117 4.2e-35 151.0 85 87.1
TAR628G0148 Trochodendron aralioides HOM05D006528 ORTHO05D008117 4.2e-35 151.0 80 92.5
vmacro01866 Vaccinium macrocarpon HOM05D006528 ORTHO05D008117 5.5e-35 150.6 85 87.1
BcaC09g52175 Brassica carinata HOM05D006528 ORTHO05D008117 9.4e-35 149.8 84 82.1
C01p05070 Brassica napus HOM05D006528 ORTHO05D008117 9.4e-35 149.8 84 82.1
BolC1t00489H Brassica oleracea HOM05D006528 ORTHO05D008117 9.4e-35 149.8 84 82.1
CARHR241740 Cardamine hirsuta HOM05D006528 ORTHO05D008117 9.4e-35 149.8 86 83.7
ClCG10G009640 Citrullus lanatus HOM05D006528 ORTHO05D008117 1.2e-34 149.4 82 89.0
DCAR_003600 Daucus carota HOM05D006528 ORTHO05D008117 1.2e-34 149.4 80 90.0
FAN20G2769 Fragaria x ananassa HOM05D006528 ORTHO05D008117 1.2e-34 149.4 85 85.9
Prupe.8G071000 Prunus persica HOM05D006528 ORTHO05D008117 1.2e-34 149.4 80 91.2
Ah.01g007370 Amaranthus hybridus HOM05D006528 ORTHO05D008117 1.6e-34 149.1 81 88.9
A01p04680 Brassica napus HOM05D006528 ORTHO05D008117 1.6e-34 149.1 82 84.1
BraA01t00451Z Brassica rapa HOM05D006528 ORTHO05D008117 1.6e-34 149.1 82 84.1
Nn5g29836 Nelumbo nucifera HOM05D006528 ORTHO05D008117 1.6e-34 149.1 79 89.9
Os03g0690000 Oryza sativa ssp. japonica HOM05D006528 ORTHO05D008117 1.6e-34 149.1 85 84.7
Peaxi162Scf00152g00928 Petunia axillaris HOM05D006528 ORTHO05D008117 1.6e-34 149.1 81 90.1
PGR142G2367 Punica granatum HOM05D006528 ORTHO05D008117 1.6e-34 149.1 85 88.2
GSVIVG01012516001 Vitis vinifera HOM05D006528 ORTHO05D008117 1.6e-34 149.1 82 90.2
CAN.G31.4 Capsicum annuum HOM05D006528 ORTHO05D008117 2.1e-34 148.7 81 91.4
Gohir.A13G050500 Gossypium hirsutum HOM05D006528 ORTHO05D008117 2.1e-34 148.7 79 92.4
Gohir.D13G049300 Gossypium hirsutum HOM05D006528 ORTHO05D008117 2.1e-34 148.7 79 92.4
Sopen11g019700 Solanum pennellii HOM05D006528 ORTHO05D008117 2.1e-34 148.7 81 91.4
PGSC0003DMG400025320 Solanum tuberosum HOM05D006528 ORTHO05D008117 2.1e-34 148.7 81 91.4
PGSC0003DMG400039300 Solanum tuberosum HOM05D006528 ORTHO05D008117 2.1e-34 148.7 81 91.4
Hma1.2p1_1093F.1_g256310 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 2.7e-34 148.3 83 91.6
Nn1g05616 Nelumbo nucifera HOM05D006528 ORTHO05D008117 2.7e-34 148.3 79 89.9
Lj4g0001130 Lotus japonicus HOM05D006528 ORTHO05D008117 3.6e-34 147.9 82 86.6
Nitab4.5_0001093g0020 Nicotiana tabacum HOM05D006528 ORTHO05D008117 3.6e-34 147.9 81 88.9
Sc05g0005550 Simmondsia chinensis HOM05D006528 ORTHO05D008117 3.6e-34 147.9 82 85.4
arahy.Tifrunner.gnm1.ann1.UT9VTR Arachis hypogaea HOM05D006528 ORTHO05D008117 6.1e-34 147.1 82 85.4
CANSAT21G1972 Cannabis sativa HOM05D006528 ORTHO05D008117 6.1e-34 147.1 84 84.5
Sed0017031 Sechium edule HOM05D006528 ORTHO05D008117 6.1e-34 147.1 82 87.8
Thhalv10026671m.g Eutrema salsugineum HOM05D006528 ORTHO05D008117 8.0e-34 146.7 81 84.0
Nitab4.5_0000001g0270 Nicotiana tabacum HOM05D006528 ORTHO05D008117 8.0e-34 146.7 81 88.9
Sp7g31370 Schrenkiella parvula HOM05D006528 ORTHO05D008117 8.0e-34 146.7 81 84.0
THA.LOC104819510 Tarenaya hassleriana HOM05D006528 ORTHO05D008117 8.0e-34 146.7 81 84.0
Ca_18387_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 1.0e-33 146.4 82 87.8
Glyma.07G182600 Glycine max HOM05D006528 ORTHO05D008117 1.0e-33 146.4 85 83.5
Glyma.08G067300 Glycine max HOM05D006528 ORTHO05D008117 1.0e-33 146.4 85 83.5
Lalb_Chr16g0382981 Lupinus albus HOM05D006528 ORTHO05D008117 1.0e-33 146.4 85 82.4
arahy.Tifrunner.gnm1.ann1.P7ITSZ Arachis hypogaea HOM05D006528 ORTHO05D008117 1.4e-33 146.0 85 84.7
Medtr2g009660 Medicago truncatula HOM05D006528 ORTHO05D008117 1.4e-33 146.0 85 84.7
HPP92_001604 Vanilla planifolia HOM05D006528 ORTHO05D008117 1.4e-33 146.0 85 83.5
Lj9A347T51 Lonicera japonica HOM05D006528 ORTHO05D008117 1.8e-33 145.6 85 85.9
Ca_00167_v3 Cicer arietinum L. HOM05D006528 ORTHO05D008117 2.3e-33 145.2 80 88.8
MELO3C018053.2 Cucumis melo HOM05D006528 ORTHO05D008117 2.3e-33 145.2 82 86.6
Migut.B00544 Erythranthe guttata HOM05D006528 ORTHO05D008117 2.3e-33 145.2 79 89.9
Hund06469 Selenicereus undatus HOM05D006528 ORTHO05D008117 2.3e-33 145.2 86 83.7
arahy.Tifrunner.gnm1.ann1.AY2SMN Arachis hypogaea HOM05D006528 ORTHO05D008117 3.0e-33 144.8 85 83.5
HanXRQChr08g0227171 Helianthus annuus HOM05D006528 ORTHO05D008117 3.0e-33 144.8 85 84.7
Lsat_1_v5_gn_7_82720 Lactuca sativa HOM05D006528 ORTHO05D008117 3.0e-33 144.8 84 84.5
MBI16_g06019_MAGBIO Magnolia biondii HOM05D006528 ORTHO05D008117 3.0e-33 144.8 103 73.8
Medtr4g093660 Medicago truncatula HOM05D006528 ORTHO05D008117 3.0e-33 144.8 85 83.5
Psat1g213920 Pisum sativum HOM05D006528 ORTHO05D008117 3.0e-33 144.8 85 83.5
AL7G17860 Arabidopsis lyrata HOM05D006528 ORTHO05D008117 3.9e-33 144.4 80 83.8
arahy.Tifrunner.gnm1.ann1.QJC347 Arachis hypogaea HOM05D006528 ORTHO05D008117 3.9e-33 144.4 82 84.1
AT4G33640 Arabidopsis thaliana HOM05D006528 ORTHO05D008117 5.2e-33 144.1 82 81.7
Psat7g101760 Pisum sativum HOM05D006528 ORTHO05D008117 6.7e-33 143.7 82 84.1
EL10Ac9g22060 Beta vulgaris HOM05D006528 ORTHO05D008117 1.1e-32 142.9 80 86.2
ECA234G2655 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.1e-32 142.9 82 84.1
AUR62027098 Chenopodium quinoa HOM05D006528 ORTHO05D008117 1.5e-32 142.5 80 86.2
Ah.01g023880 Amaranthus hybridus HOM05D006528 ORTHO05D008117 2.0e-32 142.1 81 85.2
ATR0767G170 Amborella trichopoda HOM05D006528 ORTHO05D008117 2.0e-32 142.1 84 82.1
Phvul.002G213700 Phaseolus vulgaris HOM05D006528 ORTHO05D008117 2.6e-32 141.7 80 85.0
SEGI_09895 Sequoiadendron giganteum HOM05D006528 ORTHO05D008117 2.6e-32 141.7 85 82.4
AUR62030940 Chenopodium quinoa HOM05D006528 ORTHO05D008117 3.3e-32 141.4 80 85.0
Sed0022924 Sechium edule HOM05D006528 ORTHO05D008117 9.7e-32 139.8 93 76.3
CDE07G0501 Ceratophyllum demersum HOM05D006528 ORTHO05D008117 1.3e-31 139.4 82 82.9
Lsat_1_v5_gn_5_110181 Lactuca sativa HOM05D006528 ORTHO05D008117 1.3e-31 139.4 79 84.8
Cfa004847 Carpinus fangiana HOM05D006528 ORTHO05D008117 2.2e-31 138.7 83 81.9
unitig_0.g617 Utricularia gibba HOM05D006528 ORTHO05D008117 3.7e-31 137.9 80 86.2
HanXRQChr10g0297761 Helianthus annuus HOM05D006528 ORTHO05D008117 1.4e-30 136.0 79 82.3
Potri.017G042432 Populus trichocarpa HOM05D006528 ORTHO05D008117 1.4e-30 136.0 85 78.8
QL11p025380 Quercus lobata HOM05D006528 ORTHO05D008117 1.4e-30 136.0 110 67.3
VMungo0251G1582 Vigna mungo HOM05D006528 ORTHO05D008117 9.1e-30 133.3 94 72.3
SMO358G0255 Selaginella moellendorffii HOM05D006528 ORTHO05D008117 5.9e-29 130.6 78 80.8
Mapoly0189s0006 Marchantia polymorpha HOM05D006528 ORTHO05D008117 5.0e-28 127.5 78 78.2
ECA236G0856 Erigeron canadensis HOM05D006528 ORTHO05D008117 1.2e-26 122.9 68 88.2
SalBow6G1122 Salvia bowleyana HOM05D006528 ORTHO05D008117 4.0e-25 117.9 132 51.5
SalBow6G4989 Salvia bowleyana HOM05D006528 ORTHO05D008117 4.0e-25 117.9 132 51.5
MCO12G136 Micromonas commoda HOM05D006528 ORTHO05D008117 5.2e-25 117.5 78 71.8
Solyc11g044230.3 Solanum lycopersicum HOM05D006528 ORTHO05D008117 2.8e-23 111.7 62 90.3
Pp3c17_23010 Physcomitrium patens HOM05D006528 ORTHO05D008117 4.8e-23 110.9 78 67.9
CsaV3_4G014760 Cucumis sativus L. HOM05D006528 ORTHO05D008117 2.7e-21 105.1 57 87.7
Hma1.2p1_0160F.1_g070933 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.7e-15 85.9 51 84.3
Hma1.2p1_1174F.1_g263935 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.7e-15 85.9 51 84.3
Hma1.2p1_1518F.1_g288560 Hydrangea macrophylla HOM05D006528 ORTHO05D008117 1.7e-15 85.9 51 84.3
PRCOL_00002361 Prasinoderma coloniale HOM05D006528 ORTHO05D008117 1.1e-14 83.2 85 51.8
Actinidia00310 Actinidia chinensis HOM05D006528 ORTHO05D008117 4.5e-13 77.8 49 79.6
Gorai.013G055100 Gossypium raimondii HOM05D006528 ORTHO05D008117 3.0e-09 65.1 33 93.9


User provided reference genes

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