Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 4.5e-75 284.6 158 100.0
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 1.2e-27 127.1 166 56.0
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 7.8e-19 97.8 162 45.1
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 1.0e-18 97.4 91 68.1
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 3.0e-18 95.9 110 62.7
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 1.5e-17 93.6 101 62.4
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.9e-17 93.2 161 48.4
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 9.5e-17 90.9 151 49.7
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 9.5e-17 90.9 160 47.5
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.3e-13 80.5 104 54.8
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.4e-12 77.0 105 52.4
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 1.4e-12 77.0 105 53.3
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 1.4e-12 77.0 187 39.6
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 1.9e-12 76.6 154 38.3
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 2.4e-12 76.3 102 56.9
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 5.4e-12 75.1 85 57.6
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 1.2e-11 73.9 116 47.4
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 1.2e-11 73.9 101 47.5
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 2.7e-11 72.8 170 38.8
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 4.6e-11 72.0 98 50.0
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 6.0e-11 71.6 157 36.3
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 1.3e-10 70.5 157 38.2
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 1.7e-10 70.1 184 38.6
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 5.1e-10 68.6 85 48.2
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 5.6e-09 65.1 109 46.8
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 7.3e-09 64.7 89 47.2
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 7.3e-09 64.7 85 47.1
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 9.5e-09 64.3 164 38.4
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 1.2e-08 63.9 77 53.2
CARHR231710 Cardamine hirsuta HOM05D010278 ORTHO05D012429 1.2e-08 63.9 103 46.6
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 6.2e-08 61.6 103 44.7
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 8.1e-08 61.2 169 33.1
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 8.1e-08 61.2 183 31.7
C07p53530 Brassica napus HOM05D010278 ORTHO05D012429 1.1e-07 60.8 107 39.3
BolC7t45845H Brassica oleracea HOM05D010278 ORTHO05D012429 1.1e-07 60.8 107 39.3
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 1.1e-07 60.8 109 41.3
BcaC06g32890 Brassica carinata HOM05D010278 ORTHO05D012429 1.8e-07 60.1 107 39.3
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 1.8e-07 60.1 182 31.3
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 1.8e-07 60.1 88 43.2
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 2.3e-07 59.7 90 43.3
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 4.0e-07 58.9 140 40.0
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 5.2e-07 58.5 164 34.8
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 6.8e-07 58.2 97 45.4
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 6.8e-07 58.2 171 33.9
AL7G28970 Arabidopsis lyrata HOM05D010278 ORTHO05D012429 8.9e-07 57.8 90 48.9
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 8.9e-07 57.8 100 42.0
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 1.5e-06 57.0 167 35.9
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 2.6e-06 56.2 106 42.5
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 3.4e-06 55.8 82 47.6
Lsat_1_v5_gn_5_104661 Lactuca sativa HOM05D008094 ORTHO05D010082 3.4e-06 55.8 94 42.6
Migut.B00764 Erythranthe guttata HOM05D008094 ORTHO05D010082 4.4e-06 55.5 105 41.9
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 4.4e-06 55.5 181 32.0


User provided reference genes

Program Settings