Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G021750 Manihot esculenta HOM05D016764 ORTHO05D001895 2.8e-37 157.9 70 100.0
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 4.2e-25 117.5 62 79.0
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 3.0e-23 111.3 62 74.2
Manes.10G126325 Manihot esculenta HOM05D002599 ORTHO05D001895 1.8e-20 102.1 62 72.6
Potri.004G220000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.7e-14 80.5 67 49.3
Potri.004G219600 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.4e-14 80.1 67 50.7
Potri.004G220300 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.4e-14 80.1 67 50.7
Potri.003G010800 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.3e-13 79.3 66 51.5
Potri.003G011000 Populus trichocarpa HOM05D016764 ORTHO05D001895 1.3e-13 79.3 66 51.5
Sabra03G0006300 Salix brachista HOM05D016764 ORTHO05D001895 2.0e-11 72.0 62 50.0
Sabra01G0166700 Salix brachista HOM05D016764 ORTHO05D001895 1.0e-10 69.7 62 50.0
Sabra03G0006200 Salix brachista HOM05D016764 ORTHO05D001895 1.7e-10 68.9 62 48.4
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.0e-10 67.4 61 44.3
Sabra01G0164300 Salix brachista HOM05D016764 ORTHO05D001895 3.2e-09 64.7 62 48.4
Thecc.02G090900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-08 62.4 62 41.9
Duzib187G0682 Durio zibethinus HOM05D002599 ORTHO05D001895 1.4e-07 59.3 66 37.9
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-07 58.5 62 41.9
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-07 58.2 62 41.9
Gohir.A04G121884 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.7e-07 57.0 63 39.7
Gohir.D04G163166 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.8e-07 56.6 63 39.7
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-06 56.2 62 38.7
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-06 56.2 62 38.7
Gorai.012G151200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.5e-06 55.8 63 39.7
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.6e-06 55.1 62 40.3
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 4.4e-06 54.3 61 36.1
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.7e-06 53.9 62 40.3
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.7e-06 53.9 62 40.3
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 5.7e-06 53.9 58 43.1


User provided reference genes

Program Settings