Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G021700 Manihot esculenta HOM05D002599 ORTHO05D001895 1.0e-72 276.6 133 100.0
Manes.07G021600 Manihot esculenta HOM05D002599 ORTHO05D001895 1.1e-66 256.5 133 93.2
Manes.07G021500 Manihot esculenta HOM05D002599 ORTHO05D001895 3.1e-45 185.3 131 67.2
Manes.10G124912 Manihot esculenta HOM05D002599 ORTHO05D001895 1.1e-34 150.2 124 60.5
TWI14G1236 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 1.5e-15 86.7 115 41.7
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-13 79.3 113 43.4
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.5e-12 75.1 121 38.8
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 1.7e-11 73.2 116 40.5
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.3e-11 72.8 88 45.5
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-11 72.8 104 39.4
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.9e-11 72.4 120 38.3
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.9e-11 72.0 104 39.4
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 5.0e-11 71.6 99 41.4
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-10 69.7 111 42.3
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-10 68.9 92 46.7
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.3e-10 68.6 99 37.4
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.3e-10 68.6 86 40.7
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.3e-10 67.8 85 43.5
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 7.3e-10 67.8 118 28.0
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.2e-09 67.0 105 36.2
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-09 67.0 106 39.6
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-09 66.6 103 36.9
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 1.6e-09 66.6 91 40.7
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-09 66.6 95 37.9
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.8e-09 65.9 100 39.0
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.6e-09 65.5 103 36.9
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 4.7e-09 65.1 85 41.2
COL.COLO4_17754 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.7e-09 65.1 104 39.4
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.7e-09 65.1 85 41.2
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 4.7e-09 65.1 117 36.8
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.1e-09 64.7 85 42.4
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.1e-09 64.7 105 36.2
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.0e-09 64.3 85 42.4
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.0e-09 64.3 90 44.4
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 8.0e-09 64.3 101 38.6
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-08 63.9 113 40.7
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-08 63.9 113 40.7
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.0e-08 63.9 113 40.7
Potri.004G218101 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-08 63.9 103 35.9
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-08 63.9 103 36.9
COL.COLO4_11744 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-08 63.5 86 43.0
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-08 63.5 85 38.8
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-08 63.5 103 35.9
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.8e-08 63.2 114 37.7
COL.COLO4_29532 Corchorus olitorius HOM05D002599 ORTHO05D025152 1.8e-08 63.2 107 30.8
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.3e-08 62.8 111 37.8
Thecc.04G013500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-08 62.8 97 35.1
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-08 62.4 103 34.0
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 4.0e-08 62.0 111 37.8
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.2e-08 61.6 105 38.1
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 5.2e-08 61.6 100 37.0
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 6.8e-08 61.2 117 32.5
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.8e-08 61.2 85 43.5
Gohir.A04G132600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 6.8e-08 61.2 108 29.6
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 6.8e-08 61.2 103 35.0
Gorai.012G167700 Gossypium raimondii HOM05D002599 ORTHO05D012670 8.9e-08 60.8 108 29.6
EL10Ac5g12341 Beta vulgaris HOM05D035930 ORTHO05D001895 1.2e-07 60.5 88 36.4
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-07 60.5 113 38.1
Gohir.D04G176200 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.5e-07 60.1 108 29.6
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.5e-07 60.1 91 42.9
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-07 59.7 115 33.9
Thecc.02G092100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-07 59.7 113 33.6
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-07 59.7 102 35.3
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-07 59.3 121 32.2
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.6e-07 59.3 116 38.8
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.4e-07 58.5 106 36.8
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 5.8e-07 58.2 102 37.3
Thecc.07G108500 Theobroma cacao HOM05D009888 ORTHO05D001895 5.8e-07 58.2 110 35.5
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.5e-07 57.8 101 38.6
Potri.015G016700 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.5e-07 57.8 101 32.7
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 7.5e-07 57.8 114 36.8
COL.COLO4_17180 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.8e-07 57.4 111 33.3
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.8e-07 57.4 106 36.8
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.8e-07 57.4 103 32.0
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 9.8e-07 57.4 105 34.3
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 1.3e-06 57.0 97 38.1
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.3e-06 57.0 117 32.5
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-06 57.0 102 31.4
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-06 56.6 115 33.0
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-06 56.6 115 33.0
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-06 56.6 102 31.4
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-06 56.6 105 34.3
Gohir.A04G130700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.9e-06 55.8 106 35.8
Potri.015G016450 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.9e-06 55.8 104 33.7
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-06 55.8 103 28.2
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 3.7e-06 55.5 104 33.7
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 3.7e-06 55.5 105 33.3
Thecc.02G024300 Theobroma cacao HOM05D002599 ORTHO05D012670 4.9e-06 55.1 103 27.2
Atru.chr2.66 Acer truncatum HOM05D002599 ORTHO05D001895 6.4e-06 54.7 110 27.3
Gorai.012G167400 Gossypium raimondii HOM05D019153 ORTHO05D047868 6.4e-06 54.7 128 35.2
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 6.4e-06 54.7 119 32.8
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 8.3e-06 54.3 118 28.0
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 8.3e-06 54.3 102 33.3


User provided reference genes

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