Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 7.1e-68 260.4 124 100.0
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 4.0e-63 244.6 124 94.4
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-24 116.7 117 49.6
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 4.1e-23 111.7 119 49.6
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 9.4e-20 100.5 120 45.8
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 9.4e-20 100.5 120 45.8
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 9.4e-20 100.5 120 45.8
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 4.7e-19 98.2 120 45.0
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 4.7e-19 98.2 120 45.0
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 8.0e-19 97.4 120 44.2
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-18 97.1 120 44.2
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-18 97.1 120 44.2
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-18 96.7 120 44.2
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.8e-18 96.3 119 44.5
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-18 95.9 120 44.2
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.2e-18 94.7 119 40.3
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.8e-18 94.0 120 43.3
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 8.8e-18 94.0 120 43.3
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.6e-17 92.4 119 41.2
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 9.8e-17 90.5 115 44.3
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 9.8e-17 90.5 115 44.3
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-16 90.1 110 44.5
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.4e-15 86.7 120 37.5
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-15 85.5 112 41.1
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.1e-15 85.1 109 42.2
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 4.1e-15 85.1 115 43.5
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-14 82.8 112 39.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 2.7e-14 82.4 114 36.0
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-13 79.3 121 33.1
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.8e-13 78.6 118 37.3
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-12 76.3 118 36.4
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.5e-12 75.9 111 38.7
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.2e-12 75.1 111 38.7
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 4.2e-12 75.1 91 38.5
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.1e-11 72.8 123 34.1
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 4.7e-11 71.6 91 36.3
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-10 69.3 119 27.7
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.0e-10 68.9 111 30.6
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-10 68.9 114 34.2
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 4.0e-10 68.6 101 34.7
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-10 68.6 100 34.0
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 8.8e-10 67.4 114 29.8
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-09 66.2 108 38.0
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-09 66.2 114 33.3
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-09 65.9 120 27.5
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-09 65.9 120 27.5
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.6e-09 65.9 120 27.5
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 5.7e-09 64.7 93 38.7
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.5e-09 64.3 111 37.8
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-08 63.5 111 31.5
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.3e-08 63.5 117 26.5
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-08 63.2 114 32.5
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-08 63.2 108 32.4
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.2e-08 62.8 111 33.3
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-08 62.8 105 34.3
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.2e-08 62.8 105 34.3
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-08 62.8 89 36.0
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-08 62.8 112 28.6
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-08 62.4 114 33.3
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.9e-08 61.6 110 33.6
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.3e-08 61.2 116 31.0
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 6.3e-08 61.2 122 31.1
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 8.3e-08 60.8 117 31.6
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 8.3e-08 60.8 109 35.8
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 1.4e-07 60.1 112 36.6
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-07 60.1 110 34.5
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-07 59.7 110 32.7
Sabra11G0003900 Salix brachista HOM05D008886 ORTHO05D001895 1.8e-07 59.7 110 31.8
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 1.8e-07 59.7 113 31.9
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.4e-07 59.3 112 33.9
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 116 32.8
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 112 29.5
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.1e-07 58.5 127 31.5
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.1e-07 58.5 117 30.8
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-07 58.5 113 31.0
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.4e-07 58.2 117 30.8
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.4e-07 58.2 116 35.3
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 5.4e-07 58.2 114 32.5
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.0e-07 57.8 118 31.4
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.2e-07 57.4 111 35.1
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.2e-07 57.4 118 31.4
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-06 56.6 118 30.5
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.6e-06 56.6 116 31.0
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.6e-06 56.6 88 36.4
Ah.12g052760 Amaranthus hybridus HOM05D002599 ORTHO05D001895 2.0e-06 56.2 100 36.0
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 2.0e-06 56.2 118 33.1
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-06 56.2 125 32.0
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 2.0e-06 56.2 118 33.1
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.7e-06 55.8 117 24.8
COL.COLO4_17180 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.5e-06 55.5 112 29.5
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-06 55.5 112 29.5
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.5e-06 55.5 112 29.5
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.5e-06 55.1 125 31.2
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.5e-06 55.1 125 31.2
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 4.5e-06 55.1 120 30.0
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 5.9e-06 54.7 118 32.2
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 5.9e-06 54.7 95 33.7
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.7e-06 54.3 110 28.2
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 7.7e-06 54.3 112 30.4


User provided reference genes

Program Settings