Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 4.6e-67 257.7 124 100.0
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 9.0e-63 243.4 124 94.4
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.6e-27 125.2 117 52.1
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-25 120.2 119 52.1
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 8.5e-21 104.0 120 46.7
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 8.5e-21 104.0 120 46.7
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 8.5e-21 104.0 120 46.7
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 4.2e-20 101.7 120 45.8
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 4.2e-20 101.7 120 45.8
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.2e-20 100.9 119 45.4
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 7.2e-20 100.9 120 45.0
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 9.4e-20 100.5 120 45.0
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 9.4e-20 100.5 120 45.0
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-19 100.1 120 45.0
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 2.1e-19 99.4 120 45.0
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 2.7e-19 99.0 120 45.0
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.0e-19 97.4 119 41.2
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.8e-18 96.3 120 43.3
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-18 95.5 115 46.1
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-18 95.5 115 46.1
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.0e-18 95.1 119 41.2
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-17 93.6 110 45.5
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.6e-17 92.4 120 39.2
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.4e-17 91.7 119 40.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 5.7e-17 91.3 114 39.5
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 9.8e-17 90.5 111 43.2
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-16 88.2 121 36.4
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.1e-15 87.0 108 43.5
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 1.1e-15 87.0 114 44.7
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-15 85.9 111 41.4
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 5.4e-15 84.7 91 42.9
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.2e-14 83.6 118 38.1
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-14 82.0 111 40.5
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.9e-14 81.3 111 40.5
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.9e-14 81.3 118 38.1
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 5.9e-14 81.3 91 40.7
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-13 80.1 123 35.8
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 6.5e-13 77.8 101 38.6
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 2.5e-12 75.9 105 39.0
Potri.004G219800 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-12 75.1 119 29.4
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.4e-12 73.9 107 41.1
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 9.4e-12 73.9 114 36.0
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 1.6e-11 73.2 100 37.0
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.7e-11 71.6 111 30.6
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.7e-11 71.6 114 35.1
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-10 70.1 114 31.6
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-10 69.7 120 28.3
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.8e-10 69.7 120 28.3
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.8e-10 69.7 120 28.3
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-10 69.7 111 33.3
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.0e-10 68.6 112 30.4
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 4.0e-10 68.6 92 41.3
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 4.0e-10 68.6 114 34.2
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 6.8e-10 67.8 108 34.3
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 1.2e-09 67.0 116 35.3
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-09 67.0 105 36.2
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.2e-09 67.0 105 36.2
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-09 67.0 108 38.9
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-09 66.6 116 32.8
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 1.5e-09 66.6 121 33.1
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-09 66.2 89 36.0
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-09 66.2 110 39.1
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 2.0e-09 66.2 110 37.3
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.6e-09 65.9 111 34.2
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-09 65.9 111 34.2
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 2.6e-09 65.9 117 29.1
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.4e-09 65.5 110 35.5
Gorai.005G241200 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.4e-09 65.1 118 33.9
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.4e-09 65.1 107 34.6
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 7.5e-09 64.3 114 33.3
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.8e-09 63.9 107 34.6
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 1.3e-08 63.5 111 38.7
Gohir.A03G192400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-08 63.5 118 33.1
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.3e-08 63.5 110 34.5
Potri.004G219700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-08 63.5 112 30.4
Prupe.1G574300 Prunus persica HOM05D002599 ORTHO05D001895 1.3e-08 63.5 122 35.2
Gohir.A03G192100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-08 63.2 118 32.2
Gorai.005G241300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-08 63.2 116 32.8
COL.COLO4_11750 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.2e-08 62.8 121 34.7
Thecc.02G091200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.2e-08 62.8 116 35.3
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-08 62.4 109 31.2
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.7e-08 62.0 110 32.7
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 4.9e-08 61.6 119 32.8
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.3e-08 61.2 116 32.8
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 8.3e-08 60.8 116 31.9
Sabra11G0003900 Salix brachista HOM05D008886 ORTHO05D001895 8.3e-08 60.8 110 30.9
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 1.1e-07 60.5 104 32.7
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-07 60.5 109 29.4
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-07 60.1 111 35.1
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-07 60.1 116 36.2
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-07 60.1 109 34.9
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-07 60.1 119 33.6
Thecc.02G091300 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-07 60.1 91 40.7
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-07 59.7 113 35.4
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 1.8e-07 59.7 93 34.4
Gohir.A01G182400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.4e-07 59.3 116 31.9
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 2.4e-07 59.3 117 27.4
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 109 33.9
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 4.1e-07 58.5 118 33.9
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 4.1e-07 58.5 118 33.9
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-07 58.5 96 30.2
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 4.1e-07 58.5 118 33.1
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 5.4e-07 58.2 124 33.9
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.4e-07 58.2 109 33.9
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.4e-07 58.2 110 30.0
Ah.12g052760 Amaranthus hybridus HOM05D002599 ORTHO05D001895 7.0e-07 57.8 98 34.7
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.0e-07 57.8 109 34.9
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 7.0e-07 57.8 111 32.4
COL.COLO4_17180 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.2e-07 57.4 112 29.5
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 9.2e-07 57.4 110 32.7
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 9.2e-07 57.4 118 33.9
Ah.12g052740 Amaranthus hybridus HOM05D002599 ORTHO05D001895 1.2e-06 57.0 97 38.1
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-06 57.0 124 32.3
Sabra15G0012700 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-06 57.0 87 40.2
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.6e-06 56.6 109 30.3
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.6e-06 56.6 109 30.3
Gorai.011G286700 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.6e-06 56.6 112 31.2
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 1.6e-06 56.6 119 31.9
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-06 56.2 116 32.8
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-06 56.2 112 29.5
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.0e-06 56.2 112 29.5
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 2.0e-06 56.2 111 34.2
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.5e-06 55.5 126 31.0
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-06 55.5 116 33.6
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.5e-06 55.5 108 33.3
Manes.10G124700 Manihot esculenta HOM05D008353 ORTHO05D011820 3.5e-06 55.5 109 30.3
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.5e-06 55.1 124 32.3
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-06 55.1 107 29.9
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.9e-06 54.7 111 29.7
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 5.9e-06 54.7 98 32.7
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 5.9e-06 54.7 87 35.6
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 5.9e-06 54.7 110 30.9
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.7e-06 54.3 112 32.1
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.7e-06 54.3 112 32.1
Potri.003G015900 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.7e-06 54.3 101 34.7


User provided reference genes

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