Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 6.6e-179 630.6 312 100.0
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.8e-128 463.0 314 72.3
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.9e-127 458.0 317 72.6
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 1.0e-126 457.2 323 70.9
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.8e-126 455.3 317 72.2
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.1e-125 453.8 317 72.6
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 4.2e-125 451.8 321 69.8
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.5e-125 451.4 317 71.9
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 7.2e-125 451.1 333 69.7
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-123 446.8 317 71.6
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 8.7e-123 444.1 320 70.6
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 8.7e-123 444.1 319 70.5
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 4.3e-122 441.8 319 70.2
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 4.3e-122 441.8 326 69.3
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 5.7e-122 441.4 329 69.3
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 1.3e-121 440.3 314 71.7
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 1.6e-121 439.9 329 68.7
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 3.7e-121 438.7 326 69.3
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 1.8e-120 436.4 335 66.9
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 1.5e-119 433.3 335 66.9
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 4.5e-119 431.8 328 67.1
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 1.0e-118 430.6 342 64.9
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.7e-118 429.9 316 69.6
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.7e-118 429.9 317 70.0
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 2.9e-118 429.1 326 69.3
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 3.8e-118 428.7 326 69.0
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 3.8e-118 428.7 323 68.4
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 5.5e-117 424.9 320 69.1
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 5.5e-117 424.9 319 67.7
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 2.1e-116 422.9 331 66.8
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.3e-115 419.5 314 67.5
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 3.0e-115 419.1 326 65.6
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 8.8e-115 417.5 323 66.9
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 1.1e-114 417.2 323 65.3
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 3.3e-114 415.6 333 64.3
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 1.7e-113 413.3 324 66.0
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 1.1e-112 410.6 320 66.6
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 2.4e-112 409.5 300 70.7
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.1e-112 409.1 307 67.1
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 4.1e-112 408.7 287 72.1
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 5.3e-112 408.3 304 70.1
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 5.3e-112 408.3 325 64.9
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 9.1e-112 407.5 317 66.6
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 2.6e-111 406.0 324 63.6
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 4.5e-111 405.2 323 63.8
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.5e-111 405.2 316 66.8
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 2.9e-110 402.5 326 63.8
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.0e-110 401.7 315 66.3
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 5.5e-109 398.3 327 63.0
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 7.2e-109 397.9 369 57.2
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 7.2e-109 397.9 315 64.1
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.2e-108 397.1 313 66.1
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 2.7e-108 396.0 305 66.6
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 6.1e-108 394.8 328 60.7
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 2.3e-107 392.9 291 68.4
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.0e-106 389.8 305 65.2
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 4.4e-106 388.7 314 64.6
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 8.2e-105 384.4 324 61.1
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 2.4e-104 382.9 319 61.8
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 3.1e-104 382.5 327 60.9
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 3.1e-104 382.5 322 62.7
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 4.1e-104 382.1 334 59.6
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 5.9e-103 378.3 335 60.3
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 7.2e-101 371.3 315 61.0
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 2.1e-100 369.8 312 63.5
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-99 367.1 314 63.1
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 3.3e-98 362.5 288 66.0
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 3.3e-98 362.5 321 60.1
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 3.1e-96 355.9 269 68.4
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 1.6e-95 353.6 267 65.9
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 2.0e-95 353.2 358 53.6
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 6.5e-94 348.2 284 62.3
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.1e-92 341.7 335 55.5
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.2e-89 333.2 314 56.4
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 2.8e-89 332.8 275 61.1
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 2.8e-89 332.8 328 58.5
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 1.0e-86 324.3 317 54.3
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.2e-85 318.9 267 62.9
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 9.5e-85 317.8 315 58.1
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 2.6e-82 309.7 210 72.9
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 2.6e-82 309.7 223 67.7
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 6.3e-81 305.1 312 53.2
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.4e-80 303.9 297 54.9
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.9e-79 298.5 306 56.2
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 3.3e-77 292.7 212 68.9
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.0e-74 283.5 218 67.9
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.4e-74 282.7 314 54.1
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.4e-74 282.3 316 51.3
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.3e-70 270.0 317 50.5
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.5e-69 266.5 189 68.8
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 5.6e-69 265.4 216 63.9
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 5.8e-66 255.4 268 52.6
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 3.3e-61 239.6 368 39.7
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.1e-60 235.0 171 68.4
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.3e-57 227.6 175 65.1
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.0e-54 218.0 172 65.7
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 3.1e-51 206.5 161 64.0
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 1.7e-49 200.7 137 69.3
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 2.4e-48 196.8 278 41.7
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 9.2e-48 194.9 173 53.8
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 3.0e-46 189.9 245 43.3
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 2.4e-40 170.2 283 39.6
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.5e-37 161.0 141 58.9
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 1.1e-27 128.3 241 37.8
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 2.1e-23 114.0 100 59.0
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 3.9e-22 109.8 94 62.8
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 2.1e-20 104.0 87 64.4
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 3.7e-20 103.2 62 79.0
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 4.2e-16 89.7 178 34.8
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 6.5e-09 65.9 42 76.2
SEGI_21917 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 3.6e-07 60.1 82 43.9
BcaC05g25535 Brassica carinata HOM05D007396 ORTHO05D009228 2.3e-06 57.4 102 38.2


User provided reference genes

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