Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 8.4e-73 276.9 142 100.0
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 3.3e-29 132.1 151 57.6
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 4.1e-27 125.2 112 61.6
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 7.0e-27 124.4 148 54.1
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 9.1e-27 124.0 136 56.6
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 1.2e-26 123.6 110 61.8
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 2.0e-26 122.9 107 64.5
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 4.5e-26 121.7 136 55.9
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 4.5e-26 121.7 136 55.9
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.0e-25 120.6 136 55.1
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 2.2e-25 119.4 107 62.6
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 3.8e-25 118.6 154 52.6
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 5.0e-25 118.2 82 70.7
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 2.5e-24 115.9 112 57.1
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 7.2e-24 114.4 122 52.5
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 9.4e-24 114.0 122 52.5
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.7e-23 112.5 121 52.1
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 2.7e-23 112.5 121 52.1
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 3.6e-23 112.1 70 75.7
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 6.1e-23 111.3 122 51.6
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 1.0e-22 110.5 114 53.5
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 1.4e-22 110.2 92 64.1
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 1.8e-22 109.8 72 73.6
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 2.3e-22 109.4 129 50.4
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 3.0e-22 109.0 107 57.9
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 8.8e-22 107.5 104 57.7
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 8.8e-22 107.5 135 47.4
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 8.8e-22 107.5 81 65.4
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.5e-21 106.7 87 63.2
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 2.6e-21 105.9 62 77.4
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 2.6e-21 105.9 113 52.2
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 3.4e-21 105.5 131 51.9
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 4.4e-21 105.1 126 47.6
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 5.7e-21 104.8 70 68.6
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 5.7e-21 104.8 112 55.4
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 5.7e-21 104.8 71 66.2
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 7.5e-21 104.4 93 61.3
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 7.5e-21 104.4 105 59.0
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 9.8e-21 104.0 70 67.1
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 1.3e-20 103.6 97 59.8
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 1.7e-20 103.2 97 56.7
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.7e-20 103.2 68 70.6
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 2.2e-20 102.8 132 51.5
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 2.8e-20 102.4 65 73.8
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 3.7e-20 102.1 61 75.4
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 4.8e-20 101.7 97 58.8
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 6.3e-20 101.3 76 67.1
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 6.3e-20 101.3 125 51.2
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 1.4e-19 100.1 100 60.0
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 1.4e-19 100.1 90 60.0
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 1.8e-19 99.8 97 56.7
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 3.1e-19 99.0 69 69.6
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 4.1e-19 98.6 104 52.9
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 5.4e-19 98.2 80 67.5
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 7.0e-19 97.8 117 53.8
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 9.1e-19 97.4 80 61.2
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 9.1e-19 97.4 97 55.7
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 2.7e-18 95.9 103 53.4
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 1.0e-17 94.0 90 54.4
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 1.3e-17 93.6 87 57.5
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 1.3e-17 93.6 111 49.5
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 2.9e-17 92.4 133 47.4
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 5.0e-17 91.7 86 57.0
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 8.6e-17 90.9 114 46.5
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.9e-16 89.7 81 58.0
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.5e-16 89.4 81 56.8
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 9.5e-16 87.4 136 40.4
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 9.5e-16 87.4 136 40.4
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 9.5e-16 87.4 136 40.4
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 1.2e-15 87.0 67 65.7
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 1.2e-15 87.0 110 50.0
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 1.6e-15 86.7 90 56.7
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 2.1e-15 86.3 137 43.1
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 2.8e-15 85.9 107 52.3
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 2.8e-15 85.9 118 50.0
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 3.6e-15 85.5 84 53.6
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 3.6e-15 85.5 139 43.2
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 3.6e-15 85.5 141 42.6
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 4.7e-15 85.1 90 52.2
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 8.0e-15 84.3 67 62.7
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 8.0e-15 84.3 137 43.1
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 3.0e-14 82.4 89 56.2
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 3.0e-14 82.4 75 56.0
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 5.2e-14 81.6 99 52.5
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 8.9e-14 80.9 73 57.5
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 8.9e-14 80.9 132 39.4
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 1.2e-13 80.5 136 39.7
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 3.4e-13 79.0 121 47.1
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 2.8e-12 75.9 68 58.8
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 2.8e-12 75.9 79 48.1
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 2.8e-12 75.9 83 49.4
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 4.9e-12 75.1 115 47.0
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 6.3e-12 74.7 91 47.3
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 1.4e-11 73.6 79 53.2
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 2.4e-11 72.8 78 50.0
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 1.6e-10 70.1 80 48.8
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.0e-09 67.4 62 54.8
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 3.3e-08 62.4 64 51.6
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 4.3e-08 62.0 60 58.3
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 7.3e-08 61.2 83 45.8
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 1.0e-06 57.4 80 43.8
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 1.0e-06 57.4 62 46.8


User provided reference genes

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