Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 1.7e-160 569.3 287 100.0
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 1.7e-101 373.2 268 72.4
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 2.3e-101 372.9 268 72.8
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 2.6e-97 359.4 266 70.3
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 1.6e-94 350.1 211 78.2
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 3.0e-93 345.9 224 72.8
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 4.3e-92 342.0 213 77.0
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 2.1e-91 339.7 286 60.8
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.4e-90 337.0 264 65.2
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 3.8e-88 328.9 219 70.8
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 9.3e-87 324.3 208 73.1
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.2e-86 323.9 212 72.6
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 7.9e-86 321.2 216 69.4
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 3.9e-85 318.9 286 56.6
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 8.7e-85 317.8 248 65.3
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.5e-84 316.2 243 63.8
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.3e-84 315.8 209 69.9
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 3.3e-84 315.8 219 67.1
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 3.3e-84 315.8 219 68.5
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 2.8e-83 312.8 223 65.5
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 6.2e-83 311.6 212 68.4
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 8.1e-83 311.2 209 69.4
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.1e-82 310.8 291 55.7
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 1.8e-82 310.1 219 69.4
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 1.8e-82 310.1 219 69.4
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.1e-82 309.3 205 70.2
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 6.9e-82 308.1 218 67.0
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 6.9e-82 308.1 219 64.4
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 1.5e-81 307.0 218 67.0
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.5e-81 307.0 231 65.8
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.5e-81 307.0 256 59.4
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.0e-81 306.6 263 58.6
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 3.4e-81 305.8 257 59.5
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 3.4e-81 305.8 214 65.0
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 4.5e-81 305.4 248 62.1
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 5.8e-81 305.1 213 67.6
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 7.6e-81 304.7 250 61.2
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 9.9e-81 304.3 278 55.4
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.3e-80 303.9 195 72.3
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 1.7e-80 303.5 257 59.1
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 1.7e-80 303.5 218 65.6
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 3.8e-80 302.4 252 59.5
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 6.4e-80 301.6 218 65.6
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 1.1e-79 300.8 220 68.2
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 3.2e-79 299.3 246 59.8
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.2e-79 299.3 294 56.5
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 5.5e-79 298.5 218 63.3
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 1.2e-78 297.4 251 59.0
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 4.6e-78 295.4 263 55.5
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 6.0e-78 295.0 251 59.4
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.8e-77 293.5 279 56.3
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 1.8e-77 293.5 245 60.0
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 2.3e-77 293.1 260 57.7
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 2.3e-77 293.1 202 65.8
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 3.0e-77 292.7 221 64.7
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 6.7e-77 291.6 274 54.4
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.1e-76 290.8 253 56.5
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.9e-76 290.0 284 52.5
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 1.9e-76 290.0 249 59.0
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 2.5e-76 289.7 238 60.1
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 3.3e-76 289.3 257 57.6
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 7.4e-76 288.1 232 60.8
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 9.6e-76 287.7 182 74.7
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 9.6e-76 287.7 207 65.2
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 3.7e-75 285.8 240 57.9
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 3.7e-75 285.8 206 63.6
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 6.2e-75 285.0 235 58.7
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.4e-74 283.9 211 67.8
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 1.4e-74 283.9 207 63.8
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.8e-69 266.9 182 66.5
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 4.3e-68 262.3 206 63.1
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 5.7e-68 261.9 218 59.2
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.8e-66 256.9 246 54.1
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 5.3e-66 255.4 199 60.3
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 6.9e-66 255.0 208 58.2
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 2.6e-65 253.1 262 51.5
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 8.5e-64 248.1 182 65.9
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.9e-63 246.9 188 67.6
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.9e-63 246.9 211 60.7
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 7.2e-63 245.0 180 64.4
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 2.5e-60 236.5 248 49.6
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 5.7e-60 235.3 228 54.8
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 4.2e-55 219.2 141 70.9
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 1.6e-54 217.2 219 48.4
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 7.9e-54 214.9 203 48.8
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 2.6e-52 209.9 246 46.7
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 9.7e-52 208.0 199 50.3
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 2.2e-51 206.8 274 41.6
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 4.5e-49 199.1 185 50.8
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 4.7e-46 189.1 141 61.7
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 7.2e-39 165.2 161 52.8
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 8.8e-37 158.3 110 59.1
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 1.0e-32 144.8 204 38.7
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.0e-29 132.9 93 69.9
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 3.4e-28 129.8 105 55.2
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.3e-27 127.9 144 43.8
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 2.2e-27 127.1 166 41.0
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 4.8e-27 125.9 117 58.1
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 2.0e-25 120.6 208 38.0
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.6e-22 109.8 102 52.9
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 3.2e-18 96.7 80 55.0
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 2.3e-16 90.5 224 28.1
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 1.4e-10 71.2 41 75.6
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.9e-10 70.9 78 43.6
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 5.4e-10 69.3 54 63.0
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 3.0e-08 63.5 41 63.4
QL04p088276 Quercus lobata HOM05D037085 ORTHO05D009162 7.3e-07 58.9 33 78.8


User provided reference genes

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