Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.1e-99 366.7 191 100.0
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.3e-72 275.4 152 95.4
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 7.1e-59 231.1 159 79.2
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 6.9e-46 188.0 156 70.5
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 6.7e-41 171.4 131 75.6
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.4e-38 163.7 129 72.9
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.5e-37 160.2 154 63.0
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.5e-37 160.2 97 86.6
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.1e-35 154.1 148 60.1
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 3.2e-35 152.5 154 59.7
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 4.2e-35 152.1 149 60.4
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 4.2e-35 152.1 153 58.8
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 7.2e-35 151.4 144 61.1
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.2e-34 150.6 145 60.7
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 1.6e-34 150.2 153 60.8
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 2.1e-34 149.8 155 59.4
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 2.7e-34 149.4 126 66.7
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 3.6e-34 149.1 138 64.5
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 6.1e-34 148.3 154 57.1
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 7.9e-34 147.9 111 67.6
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.4e-33 147.1 146 59.6
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.8e-33 146.7 131 61.1
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 3.9e-33 145.6 150 56.0
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 3.9e-33 145.6 132 64.4
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 5.1e-33 145.2 155 54.8
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 8.8e-33 144.4 146 57.5
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 8.8e-33 144.4 126 63.5
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.1e-32 144.1 96 74.0
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.5e-32 143.7 107 72.0
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 3.3e-32 142.5 146 56.2
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 7.4e-32 141.4 105 70.5
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 7.4e-32 141.4 89 84.3
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 7.4e-32 141.4 152 55.9
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 7.4e-32 141.4 123 63.4
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 9.7e-32 141.0 110 68.2
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 9.7e-32 141.0 141 56.7
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 1.3e-31 140.6 109 71.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.3e-31 140.6 132 62.9
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.3e-31 140.6 104 70.2
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.3e-31 140.6 104 70.2
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.7e-31 140.2 152 56.6
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 1.7e-31 140.2 132 59.1
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.2e-31 139.8 145 58.6
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.2e-31 139.8 108 68.5
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.8e-31 139.4 138 58.0
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 3.7e-31 139.0 122 63.1
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.7e-31 139.0 122 63.1
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 4.8e-31 138.7 122 63.1
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.1e-30 137.5 134 58.2
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.1e-30 137.5 122 62.3
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 1.1e-30 137.5 91 76.9
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.4e-30 137.1 122 62.3
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.4e-30 136.3 95 72.6
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.1e-30 136.0 145 53.8
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 4.1e-30 135.6 138 57.2
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 6.9e-30 134.8 110 65.5
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 1.2e-29 134.0 103 68.9
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 1.5e-29 133.7 132 57.6
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.0e-29 133.3 132 55.3
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.4e-29 132.5 95 74.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 4.5e-29 132.1 122 59.0
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 4.5e-29 132.1 123 63.4
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 7.7e-29 131.3 109 63.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.3e-28 130.6 103 64.1
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.3e-28 130.6 99 67.7
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.3e-28 130.6 91 72.5
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 1.3e-28 130.6 126 60.3
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 2.2e-28 129.8 107 59.8
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 2.9e-28 129.4 129 57.4
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 5.0e-28 128.6 131 53.4
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 5.0e-28 128.6 98 64.3
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 5.0e-28 128.6 149 53.0
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 6.5e-28 128.3 131 52.7
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 6.5e-28 128.3 97 63.9
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 8.5e-28 127.9 99 65.7
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.1e-27 127.5 98 63.3
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.1e-27 127.5 122 55.7
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.9e-27 126.7 97 62.9
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 3.2e-27 125.9 98 62.2
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 4.2e-27 125.6 100 63.0
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.2e-27 125.6 91 68.1
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 5.5e-27 125.2 98 61.2
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.6e-26 123.6 153 50.3
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 2.1e-26 123.2 119 57.1
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.1e-26 123.2 133 52.6
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 2.7e-26 122.9 86 68.6
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 2.7e-26 122.9 81 80.2
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 4.7e-26 122.1 95 63.2
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 6.1e-26 121.7 100 61.0
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 6.1e-26 121.7 96 63.5
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.4e-25 120.6 92 64.1
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 2.3e-25 119.8 95 60.0
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 5.2e-25 118.6 163 44.2
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 8.8e-25 117.9 118 53.4
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.1e-24 117.5 91 68.1
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.5e-24 117.1 94 63.8
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 4.8e-23 112.1 94 59.6
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 4.1e-22 109.0 100 51.0
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 2.0e-21 106.7 81 67.9
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 7.7e-21 104.8 94 59.6
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.1e-19 100.9 93 52.7
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 1.2e-18 97.4 92 56.5
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 1.0e-17 94.4 124 44.4
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 2.3e-17 93.2 57 84.2
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 2.3e-17 93.2 56 85.7
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 8.8e-17 91.3 148 37.2
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 8.8e-17 91.3 108 50.0
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.2e-16 90.9 123 39.8
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.2e-16 90.9 93 50.5
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.6e-16 89.7 105 49.5
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 8.2e-15 84.7 90 48.9
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.3e-12 77.4 97 41.2
TPR.G3235 Trifolium pratense HOM05D007055 ORTHO05D008943 4.4e-08 62.4 82 50.0
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 1.7e-07 60.5 100 47.0


User provided reference genes

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