Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 2.7e-80 302.0 159 100.0
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.5e-41 173.3 155 67.7
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 2.4e-36 156.0 154 63.0
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.3e-33 145.6 154 59.7
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 7.1e-28 127.9 77 87.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 7.1e-28 127.9 154 56.5
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.4e-23 113.6 82 72.0
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 4.0e-23 112.1 122 54.9
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 5.2e-23 111.7 90 65.6
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 7.6e-22 107.8 75 70.7
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 9.9e-22 107.5 87 65.5
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 3.8e-21 105.5 74 71.6
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.8e-21 105.5 122 54.1
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 6.4e-21 104.8 73 75.3
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 6.4e-21 104.8 69 75.4
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 1.1e-20 104.0 75 70.7
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 1.1e-20 104.0 74 68.9
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 1.1e-20 104.0 75 72.0
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 1.4e-20 103.6 113 56.6
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.4e-20 103.6 80 68.8
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 1.9e-20 103.2 74 71.6
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.9e-20 103.2 76 71.1
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.9e-20 103.2 75 72.0
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 4.2e-20 102.1 74 67.6
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 7.1e-20 101.3 75 69.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 9.3e-20 100.9 97 60.8
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 9.3e-20 100.9 69 72.5
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 2.7e-19 99.4 70 71.4
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 3.5e-19 99.0 144 47.9
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 6.0e-19 98.2 72 66.7
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 1.0e-18 97.4 74 67.6
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.0e-18 97.4 75 64.0
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 1.0e-18 97.4 113 58.4
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 1.7e-18 96.7 77 62.3
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.7e-18 96.7 108 50.9
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.7e-18 96.7 67 71.6
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.7e-18 96.7 74 64.9
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.3e-18 96.3 76 61.8
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.3e-18 96.3 74 63.5
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.3e-18 96.3 74 63.5
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.3e-18 96.3 74 63.5
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 2.3e-18 96.3 68 72.1
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.0e-18 95.9 119 48.7
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 3.9e-18 95.5 75 61.3
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 3.9e-18 95.5 118 52.5
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.9e-18 95.5 74 64.9
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 3.9e-18 95.5 74 64.9
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 6.6e-18 94.7 116 52.6
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 6.6e-18 94.7 77 61.0
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 8.7e-18 94.4 130 47.7
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 8.7e-18 94.4 74 62.2
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 8.7e-18 94.4 75 62.7
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 8.7e-18 94.4 72 68.1
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.1e-17 94.0 77 61.0
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.1e-17 94.0 77 61.0
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.1e-17 94.0 76 64.5
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.1e-17 94.0 74 64.9
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 1.1e-17 94.0 74 66.2
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.9e-17 93.2 75 64.0
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.9e-17 93.2 68 70.6
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.9e-17 93.2 75 61.3
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 2.5e-17 92.8 77 59.7
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 3.3e-17 92.4 133 49.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 3.3e-17 92.4 109 56.0
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 3.3e-17 92.4 114 53.5
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 4.3e-17 92.0 58 79.3
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 4.3e-17 92.0 143 46.9
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 5.6e-17 91.7 77 58.4
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 5.6e-17 91.7 77 58.4
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 5.6e-17 91.7 131 45.8
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 7.3e-17 91.3 119 53.8
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 7.3e-17 91.3 72 63.9
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 7.3e-17 91.3 109 55.0
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 7.3e-17 91.3 121 47.1
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 1.6e-16 90.1 74 59.5
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 1.6e-16 90.1 132 47.0
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 2.8e-16 89.4 72 62.5
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 3.6e-16 89.0 120 50.8
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 8.1e-16 87.8 71 62.0
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 8.1e-16 87.8 114 50.9
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.8e-15 86.7 105 50.5
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.8e-15 86.7 104 50.0
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 2.4e-15 86.3 72 59.7
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 3.1e-15 85.9 74 62.2
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 4.0e-15 85.5 105 52.4
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 6.9e-15 84.7 121 49.6
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 6.9e-15 84.7 125 47.2
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 6.9e-15 84.7 52 76.9
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 6.9e-15 84.7 123 48.0
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 6.9e-15 84.7 127 45.7
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 6.9e-15 84.7 73 57.5
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 6.9e-15 84.7 55 76.4
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.2e-14 84.0 75 56.0
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.2e-14 84.0 74 58.1
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.5e-14 83.6 74 52.7
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.6e-14 82.8 70 60.0
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 3.4e-14 82.4 98 52.0
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 3.4e-14 82.4 130 43.8
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 5.8e-14 81.6 97 43.3
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 2.9e-13 79.3 124 42.7
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.4e-12 77.0 87 48.3
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.9e-12 76.6 133 42.1
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 4.2e-12 75.5 71 50.7
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 3.5e-11 72.4 67 59.7
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.0e-10 70.9 73 54.8
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 3.0e-10 69.3 66 53.0
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 8.7e-10 67.8 72 48.6
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 1.1e-09 67.4 69 50.7
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 2.5e-09 66.2 75 50.7
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 3.6e-08 62.4 50 60.0
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 4.0e-07 58.9 63 47.6
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 3.4e-06 55.8 67 43.3


User provided reference genes

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