Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.9e-79 298.1 156 100.0
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.6e-72 276.2 152 95.4
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 1.4e-57 226.5 154 78.6
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 9.0e-44 180.6 154 68.2
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.5e-38 163.3 129 72.1
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.8e-37 159.1 129 70.5
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 8.2e-37 157.5 99 82.8
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 1.3e-34 150.2 144 59.7
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.3e-34 150.2 154 59.7
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 2.9e-34 149.1 154 58.4
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 8.5e-34 147.5 151 58.9
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 8.5e-34 147.5 150 60.7
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 2.5e-33 146.0 150 58.7
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 5.5e-33 144.8 138 60.9
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 5.5e-33 144.8 147 59.2
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 7.2e-33 144.4 128 61.7
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 9.4e-33 144.1 150 57.3
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 9.4e-33 144.1 145 59.3
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 2.7e-32 142.5 141 58.9
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 4.6e-32 141.7 119 67.2
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 6.1e-32 141.4 150 56.0
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 7.9e-32 141.0 146 56.2
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 7.9e-32 141.0 123 63.4
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 1.0e-31 140.6 146 55.5
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.4e-31 140.2 109 67.9
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 1.8e-31 139.8 110 64.5
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 3.9e-31 138.7 101 72.3
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 3.9e-31 138.7 92 73.9
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 5.1e-31 138.3 105 69.5
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 5.1e-31 138.3 105 69.5
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 5.1e-31 138.3 112 66.1
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 6.7e-31 137.9 123 61.8
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 8.8e-31 137.5 98 73.5
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 8.8e-31 137.5 132 61.4
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.1e-30 137.1 97 70.1
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.1e-30 137.1 97 70.1
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 1.1e-30 137.1 143 55.9
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 1.5e-30 136.7 146 53.4
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.0e-30 136.3 137 60.6
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 2.5e-30 136.0 146 54.1
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.5e-30 136.0 122 61.5
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 2.5e-30 136.0 122 61.5
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.3e-30 135.6 122 61.5
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 3.3e-30 135.6 152 53.3
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 4.3e-30 135.2 102 69.6
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 4.3e-30 135.2 87 82.8
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 7.4e-30 134.4 122 60.7
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 7.4e-30 134.4 159 51.6
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 9.7e-30 134.0 122 60.7
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.7e-29 133.3 134 56.7
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 2.2e-29 132.9 100 69.0
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 2.8e-29 132.5 95 70.5
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 3.7e-29 132.1 138 55.8
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 4.8e-29 131.7 101 67.3
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 1.1e-28 130.6 130 54.6
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 1.1e-28 130.6 141 52.5
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 2.4e-28 129.4 107 64.5
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 2.4e-28 129.4 122 57.4
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 3.1e-28 129.0 95 72.6
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 3.1e-28 129.0 106 61.3
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 4.1e-28 128.6 84 78.6
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 5.3e-28 128.3 100 67.0
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 6.9e-28 127.9 106 64.2
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 1.2e-27 127.1 113 59.3
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.2e-27 127.1 90 72.2
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 1.5e-27 126.7 123 59.3
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 2.0e-27 126.3 125 57.6
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 2.6e-27 125.9 96 64.6
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 2.6e-27 125.9 123 54.5
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 2.6e-27 125.9 145 52.4
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 2.6e-27 125.9 141 56.0
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 3.4e-27 125.6 100 62.0
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 4.5e-27 125.2 98 66.3
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 5.9e-27 124.8 96 63.5
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 5.9e-27 124.8 99 64.6
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 7.7e-27 124.4 91 68.1
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 1.7e-26 123.2 98 60.2
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 1.7e-26 123.2 98 63.3
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.7e-26 123.2 96 62.5
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 1.7e-26 123.2 96 62.5
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 2.2e-26 122.9 91 67.0
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.9e-26 122.5 100 63.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 3.8e-26 122.1 127 52.0
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 5.0e-26 121.7 81 79.0
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 8.5e-26 120.9 125 51.2
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 8.5e-26 120.9 100 61.0
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 2.5e-25 119.4 95 62.1
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 2.5e-25 119.4 92 64.1
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 3.2e-25 119.0 96 62.5
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 4.2e-25 118.6 86 66.3
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.1e-24 116.3 151 47.7
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 3.6e-24 115.5 94 63.8
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 3.6e-24 115.5 110 54.5
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.8e-23 113.2 90 66.7
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 2.3e-23 112.8 111 54.1
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 8.8e-23 110.9 163 42.9
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 3.3e-22 109.0 94 58.5
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 4.8e-21 105.1 95 51.6
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.4e-20 103.6 94 59.6
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 2.4e-20 102.8 77 68.8
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 3.5e-19 99.0 93 51.6
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 8.5e-18 94.4 108 50.9
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 5.5e-17 91.7 55 85.5
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 9.4e-17 90.9 58 81.0
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 9.4e-17 90.9 124 43.5
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 8.0e-16 87.8 126 41.3
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 8.0e-16 87.8 134 38.1
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 8.0e-16 87.8 93 49.5
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 1.8e-15 86.7 108 47.2
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.3e-15 86.3 124 44.4
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 2.2e-13 79.7 101 45.5
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 3.1e-12 75.9 97 40.2
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 4.0e-07 58.9 97 42.3
TPR.G3235 Trifolium pratense HOM05D007055 ORTHO05D008943 4.4e-06 55.5 85 44.7


User provided reference genes

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