Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 6.7e-79 297.4 159 100.0
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.9e-58 228.8 156 84.0
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 1.1e-57 226.9 159 79.2
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.6e-56 221.9 154 78.6
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 6.6e-42 174.5 155 67.7
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 2.5e-33 146.0 133 64.7
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 8.1e-32 141.0 131 63.4
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.8e-31 139.8 89 83.1
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 1.5e-30 136.7 99 74.7
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 4.9e-29 131.7 126 61.9
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 9.2e-28 127.5 116 62.9
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 1.6e-27 126.7 150 52.7
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 1.6e-27 126.7 150 53.3
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 4.6e-27 125.2 146 54.1
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 6.0e-27 124.8 116 64.7
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 7.8e-27 124.4 152 52.6
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 7.8e-27 124.4 158 50.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 7.8e-27 124.4 94 64.9
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 7.8e-27 124.4 156 52.6
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 1.0e-26 124.0 138 54.3
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 1.3e-26 123.6 110 60.0
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.3e-26 123.6 124 58.1
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 1.3e-26 123.6 126 62.7
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 1.7e-26 123.2 130 57.7
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 2.3e-26 122.9 148 52.0
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 2.3e-26 122.9 140 54.3
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.3e-26 122.9 107 64.5
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 2.3e-26 122.9 100 67.0
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 3.0e-26 122.5 146 55.5
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 3.0e-26 122.5 113 61.9
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 3.0e-26 122.5 128 57.8
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 3.9e-26 122.1 102 65.7
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 6.6e-26 121.3 103 64.1
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 6.6e-26 121.3 123 56.9
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 6.6e-26 121.3 158 51.3
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 6.6e-26 121.3 142 52.1
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 1.1e-25 120.6 104 65.4
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.1e-25 120.6 152 52.0
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 1.1e-25 120.6 104 61.5
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 1.5e-25 120.2 107 60.7
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 1.5e-25 120.2 124 57.3
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.5e-25 120.2 124 57.3
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.5e-25 120.2 124 57.3
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.9e-25 119.8 124 57.3
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 1.9e-25 119.8 124 56.5
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 2.5e-25 119.4 161 51.6
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 3.3e-25 119.0 90 67.8
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 5.6e-25 118.2 124 56.5
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 7.3e-25 117.9 97 67.0
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 7.3e-25 117.9 95 67.4
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 9.6e-25 117.5 98 62.2
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.1e-24 116.3 94 62.8
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.1e-24 116.3 122 55.7
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 2.8e-24 115.9 106 61.3
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 3.6e-24 115.5 95 65.3
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 4.7e-24 115.2 152 49.3
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 4.7e-24 115.2 125 56.0
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 6.2e-24 114.8 100 61.0
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 6.2e-24 114.8 121 54.5
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 8.1e-24 114.4 93 64.5
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 8.1e-24 114.4 118 59.3
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 8.1e-24 114.4 116 56.9
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.1e-23 114.0 125 54.4
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.4e-23 113.6 100 60.0
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 1.4e-23 113.6 128 53.1
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.8e-23 113.2 109 56.0
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 4.0e-23 112.1 100 59.0
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 4.0e-23 112.1 123 53.7
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.0e-23 112.1 98 59.2
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 5.2e-23 111.7 102 58.8
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 5.2e-23 111.7 100 59.0
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 5.2e-23 111.7 154 46.8
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 6.8e-23 111.3 96 60.4
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 6.8e-23 111.3 136 52.2
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 1.2e-22 110.5 97 60.8
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 2.0e-22 109.8 96 59.4
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 2.0e-22 109.8 133 51.9
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 2.6e-22 109.4 105 56.2
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 3.4e-22 109.0 127 51.2
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 5.8e-22 108.2 81 72.8
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 9.9e-22 107.5 92 60.9
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 9.9e-22 107.5 123 53.7
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 9.9e-22 107.5 123 52.8
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.3e-21 107.1 104 56.7
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 2.2e-21 106.3 104 55.8
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 4.9e-21 105.1 85 60.0
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 6.4e-21 104.8 117 53.8
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 8.4e-21 104.4 95 56.8
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 1.9e-20 103.2 97 57.7
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 3.2e-20 102.4 130 46.9
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 3.2e-20 102.4 90 63.3
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 9.3e-20 100.9 154 42.9
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 9.3e-20 100.9 93 54.8
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.6e-19 100.1 128 47.7
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.9e-18 95.5 80 62.5
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 5.1e-18 95.1 142 44.4
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 8.7e-18 94.4 101 53.5
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 1.9e-17 93.2 97 54.6
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 3.3e-17 92.4 162 38.9
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 3.6e-16 89.0 95 46.3
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 6.9e-15 84.7 60 75.0
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 9.9e-14 80.9 96 44.8
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 2.2e-13 79.7 99 45.5
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 4.9e-13 78.6 111 43.2
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 1.1e-12 77.4 51 78.4
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 5.4e-12 75.1 152 34.9
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 1.2e-11 73.9 126 39.7
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.7e-11 72.8 106 43.4
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 3.5e-11 72.4 91 45.1
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.3e-10 69.7 106 41.5
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 3.9e-10 68.9 88 44.3
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.4e-07 60.5 97 35.1


User provided reference genes

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