Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 1.1e-130 469.9 240 100.0
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 1.6e-71 273.5 231 68.8
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.2e-55 220.7 254 52.0
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 3.0e-54 216.1 261 52.1
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 3.3e-53 212.6 256 52.3
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 5.3e-51 205.3 257 52.9
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 2.0e-50 203.4 256 50.4
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 9.9e-50 201.1 265 50.2
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 1.1e-48 197.6 269 50.2
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.1e-48 197.6 260 50.0
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 5.4e-48 195.3 256 48.4
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.5e-47 192.6 255 49.8
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 4.6e-47 192.2 255 49.8
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.9e-47 191.4 254 49.6
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 7.9e-47 191.4 258 47.7
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.5e-45 187.2 256 46.5
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.6e-42 176.4 256 46.1
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.7e-41 173.7 241 47.3
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 6.4e-41 171.8 257 42.0
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 8.4e-41 171.4 259 48.3
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.4e-40 170.6 260 46.2
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.9e-40 170.2 257 45.9
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.4e-40 169.9 253 45.8
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 7.1e-40 168.3 257 45.1
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 9.3e-40 167.9 257 45.5
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 1.0e-38 164.5 257 40.9
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 5.1e-38 162.2 233 47.6
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 8.2e-36 154.8 252 46.4
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.1e-35 154.5 259 44.0
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.4e-35 154.1 232 40.9
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.8e-35 153.7 234 43.6
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 5.3e-35 152.1 264 42.0
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.0e-33 147.9 260 40.0
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 2.9e-33 146.4 253 45.5
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 2.5e-32 143.3 234 41.5
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.2e-32 142.9 224 45.1
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 7.1e-32 141.7 234 41.9
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 3.5e-31 139.4 190 44.7
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 1.3e-28 131.0 276 37.0
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.6e-28 130.6 256 39.8
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.8e-28 129.0 202 43.1
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.8e-27 127.1 235 37.0
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 5.3e-27 125.6 206 42.7
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 9.0e-27 124.8 214 44.9
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.2e-26 124.4 249 36.9
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 1.5e-26 124.0 256 41.4
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 5.9e-26 122.1 280 37.9
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 1.0e-25 121.3 251 39.0
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 2.2e-25 120.2 211 43.6
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 3.8e-25 119.4 233 36.5
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 8.5e-25 118.2 172 47.1
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 5.5e-24 115.5 260 38.5
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 5.5e-24 115.5 271 37.3
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 7.2e-24 115.2 246 35.4
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.6e-23 114.0 259 38.6
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 6.1e-23 112.1 228 39.5
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 7.9e-23 111.7 151 44.4
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 1.3e-22 110.9 227 38.8
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 5.1e-22 109.0 254 37.4
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 1.9e-21 107.1 282 37.6
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.9e-21 107.1 198 39.4
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 1.9e-21 107.1 198 39.4
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 1.3e-20 104.4 255 37.3
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 1.3e-20 104.4 264 36.7
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 2.2e-20 103.6 273 35.5
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 6.3e-20 102.1 258 36.0
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 6.3e-20 102.1 270 35.9
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 8.2e-20 101.7 251 37.5
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.8e-19 100.5 165 41.2
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 2.4e-19 100.1 263 37.3
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 4.1e-19 99.4 260 36.5
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.5e-18 97.4 243 37.4
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.5e-18 97.4 208 38.9
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 2.0e-18 97.1 252 33.3
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 2.6e-18 96.7 209 38.8
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 3.4e-18 96.3 243 38.7
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 4.5e-18 95.9 270 32.6
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 7.7e-18 95.1 261 35.2
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 1.0e-17 94.7 243 37.0
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.3e-17 94.4 253 34.8
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 1.3e-17 94.4 238 35.7
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 2.9e-17 93.2 256 35.2
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 5.0e-17 92.4 251 35.1
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 5.0e-17 92.4 265 34.3
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 8.5e-17 91.7 227 36.1
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.1e-16 91.3 233 37.3
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.9e-16 90.5 152 46.1
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 7.2e-16 88.6 268 28.7
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.8e-14 84.0 204 32.8
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 3.0e-14 83.2 210 33.8
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 3.0e-14 83.2 260 31.5
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 5.1e-14 82.4 256 32.8
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.7e-14 82.0 256 33.2
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 8.8e-14 81.6 256 32.8
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.1e-13 81.3 258 34.5
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 1.5e-13 80.9 258 34.5
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 7.4e-13 78.6 125 42.4
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 1.3e-12 77.8 248 31.5
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.7e-12 76.3 261 34.1
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.7e-12 76.3 256 32.0
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 2.4e-11 73.6 262 32.1
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.1e-11 73.2 260 33.5
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 3.4e-10 69.7 232 30.2
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 3.4e-10 69.7 200 32.5
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.0e-09 68.2 106 40.6
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 6.5e-09 65.5 243 29.2
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 8.5e-09 65.1 193 29.0
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.4e-08 64.3 235 28.9
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 7.2e-08 62.0 254 27.6
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.7e-07 60.1 258 28.7
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 3.6e-07 59.7 258 28.7
Hund04846 Selenicereus undatus HOM05D014004 ORTHO05D015823 1.0e-06 58.2 214 30.4
Hund04848 Selenicereus undatus HOM05D014004 ORTHO05D015823 2.3e-06 57.0 169 32.0
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 5.2e-06 55.8 161 30.4


User provided reference genes

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