Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G149600 Manihot esculenta HOM05D008240 ORTHO05D010333 6.3e-25 116.7 61 100.0
Manes.14G024900 Manihot esculenta HOM05D008240 ORTHO05D010333 8.5e-22 106.3 61 91.8
Ciclev10006392m.g Citrus clementina HOM05D008240 ORTHO05D010333 9.3e-21 102.8 58 89.7
Haze_00010 Corylus avellana HOM05D008240 ORTHO05D010333 3.0e-19 97.8 58 82.8
Gorai.008G276000 Gossypium raimondii HOM05D008240 ORTHO05D010333 5.1e-19 97.1 60 78.3
COL.COLO4_03572 Corchorus olitorius HOM05D008240 ORTHO05D010333 6.7e-19 96.7 60 76.7
COL.COLO4_28004 Corchorus olitorius HOM05D008240 ORTHO05D010333 6.7e-19 96.7 60 76.7
Gohir.D12G257700 Gossypium hirsutum HOM05D008240 ORTHO05D010333 2.5e-18 94.7 60 78.3
Actinidia34129 Actinidia chinensis HOM05D000206 ORTHO05D002863 7.4e-18 93.2 55 78.2
Thecc.03G179600 Theobroma cacao HOM05D008240 ORTHO05D010333 7.4e-18 93.2 60 76.7
Dinv28418 Davidia involucrata HOM05D008240 ORTHO05D002863 1.3e-17 92.4 58 75.9
Gohir.A12G256400 Gossypium hirsutum HOM05D008240 ORTHO05D010333 1.3e-17 92.4 60 76.7
CiPaw.06G002300 Carya illinoinensis HOM05D008240 ORTHO05D010333 2.2e-17 91.7 59 78.0
Hma1.2p1_0227F.1_g095850 Hydrangea macrophylla HOM05D008240 ORTHO05D010333 2.8e-17 91.3 50 86.0
vmacro06659 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 2.8e-17 91.3 59 76.3
Sc13g0008860 Simmondsia chinensis HOM05D008240 ORTHO05D010333 4.8e-17 90.5 60 75.0
Glyma.12G005800 Glycine max HOM05D008240 ORTHO05D010333 1.1e-16 89.4 62 75.8
Psat6g197280 Pisum sativum HOM05D008240 ORTHO05D010333 1.1e-16 89.4 60 78.3
TPR.G27012 Trifolium pratense HOM05D008240 ORTHO05D010333 1.1e-16 89.4 60 78.3
VMungo1127G0785 Vigna mungo HOM05D008240 ORTHO05D010333 1.8e-16 88.6 61 77.0
CSS0023725 Camellia sinensis var. sinensis HOM05D008240 ORTHO05D010333 3.1e-16 87.8 61 75.4
Phvul.011G006600 Phaseolus vulgaris HOM05D008240 ORTHO05D010333 3.1e-16 87.8 61 75.4
Medtr1g100890 Medicago truncatula HOM05D008240 ORTHO05D010333 4.1e-16 87.4 60 76.7
Nn6g33426 Nelumbo nucifera HOM05D008240 ORTHO05D010333 5.3e-16 87.0 60 71.7
Atru.chr1.425 Acer truncatum HOM05D008240 ORTHO05D010333 6.9e-16 86.7 55 80.0
Prupe.2G297100 Prunus persica HOM05D008240 ORTHO05D010333 9.0e-16 86.3 48 87.5
arahy.Tifrunner.gnm1.ann1.ES0TVM Arachis hypogaea HOM05D008240 ORTHO05D010333 1.2e-15 85.9 60 75.0
Sabra01G0148200 Salix brachista HOM05D008240 ORTHO05D010333 1.2e-15 85.9 50 86.0
RcHm_v2.0_Chr1g0377781 Rosa chinensis HOM05D008240 ORTHO05D010333 2.0e-15 85.1 55 72.7
FvH4_7g29780 Fragaria vesca HOM05D008240 ORTHO05D010333 3.4e-15 84.3 52 76.9
arahy.Tifrunner.gnm1.ann1.MUHC0Z Arachis hypogaea HOM05D002671 ORTHO05D010333 4.5e-15 84.0 60 73.3
EL10Ac3g05606 Beta vulgaris HOM05D008240 ORTHO05D010333 4.5e-15 84.0 60 68.3
Potri.001G178400 Populus trichocarpa HOM05D008240 ORTHO05D010333 4.5e-15 84.0 53 81.1
Cpa.g.sc107.72 Carica papaya HOM05D008240 ORTHO05D010333 5.9e-15 83.6 61 68.9
AUR62021162 Chenopodium quinoa HOM05D008240 ORTHO05D010333 5.9e-15 83.6 60 68.3
Lalb_Chr21g0305111 Lupinus albus HOM05D008240 ORTHO05D010333 5.9e-15 83.6 50 78.0
Glyma.09G230900 Glycine max HOM05D008240 ORTHO05D010333 7.7e-15 83.2 61 72.1
EL10Ac3g05605 Beta vulgaris HOM05D008240 ORTHO05D010333 1.0e-14 82.8 59 67.8
Lsat_1_v5_gn_9_55121 Lactuca sativa HOM05D008240 ORTHO05D010333 1.7e-14 82.0 54 75.9
Oeu045392.1 Olea europaea HOM05D008240 ORTHO05D010333 2.2e-14 81.6 51 76.5
GSVIVG01028913001 Vitis vinifera HOM05D008240 ORTHO05D010333 1.9e-13 78.6 46 84.8
ClCG10G005770 Citrullus lanatus HOM05D008240 ORTHO05D010333 5.5e-13 77.0 57 68.4
DCAR_020258 Daucus carota HOM05D008240 ORTHO05D010333 9.4e-13 76.3 56 66.1
Sed0005066 Sechium edule HOM05D008240 ORTHO05D010333 2.1e-12 75.1 57 64.9
MELO3C025428.2 Cucumis melo HOM05D008240 ORTHO05D010333 3.6e-12 74.3 57 68.4
BraA06t24953Z Brassica rapa HOM05D008240 ORTHO05D010333 4.6e-12 73.9 52 65.4
Carub.0005s1524 Capsella rubella HOM05D008240 ORTHO05D010333 7.9e-12 73.2 56 64.3
CARHR157860 Cardamine hirsuta HOM05D008240 ORTHO05D010333 1.0e-11 72.8 42 78.6
BolC8t50025H Brassica oleracea HOM05D008240 ORTHO05D010333 1.8e-11 72.0 52 63.5
Aqoxy7G00310 Aquilegia oxysepala HOM05D008240 ORTHO05D010333 2.3e-11 71.6 47 66.0
A06p18700 Brassica napus HOM05D002671 ORTHO05D010333 3.0e-11 71.2 47 70.2
CsaV3_3G005460 Cucumis sativus L. HOM05D008240 ORTHO05D010333 6.7e-11 70.1 57 64.9
Peaxi162Scf00444g00412 Petunia axillaris HOM05D008240 ORTHO05D010333 2.0e-10 68.6 52 67.3
Solyc03g025480.4 Solanum lycopersicum HOM05D008240 ORTHO05D010333 2.6e-10 68.2 55 60.0
Sopen03g004320 Solanum pennellii HOM05D008240 ORTHO05D010333 2.6e-10 68.2 55 60.0
CAN.G1175.10 Capsicum annuum HOM05D008240 ORTHO05D010333 3.3e-10 67.8 50 68.0
Migut.F01103 Erythranthe guttata HOM05D008240 ORTHO05D010333 4.4e-10 67.4 53 62.3
PGSC0003DMG400015797 Solanum tuberosum HOM05D008240 ORTHO05D010333 7.4e-10 66.6 55 60.0
Nitab4.5_0004439g0090 Nicotiana tabacum HOM05D008240 ORTHO05D010333 5.3e-08 60.5 34 79.4
Nitab4.5_0000885g0010 Nicotiana tabacum HOM05D011433 ORTHO05D010333 9.1e-08 59.7 48 60.4
Os07g0175200 Oryza sativa ssp. japonica HOM05D008240 ORTHO05D010333 1.2e-07 59.3 47 57.4
Nitab4.5_0000084g0100 Nicotiana tabacum HOM05D008240 ORTHO05D010333 3.4e-07 57.8 41 73.2
COL.COLO4_34154 Corchorus olitorius HOM05D008240 ORTHO05D010333 2.2e-06 55.1 32 75.0
Pp3c4_4750 Physcomitrium patens HOM05D008240 ORTHO05D010333 2.2e-06 55.1 46 63.0
Mapoly0108s0016 Marchantia polymorpha HOM05D008240 ORTHO05D010333 3.8e-06 54.3 37 64.9
QL07p048914 Quercus lobata HOM05D008240 ORTHO05D010333 3.8e-06 54.3 34 76.5
Sabra06G0129100 Salix brachista HOM05D008240 ORTHO05D010333 3.8e-06 54.3 44 68.2
Sabra12G0001400 Salix brachista HOM05D008240 ORTHO05D010333 3.8e-06 54.3 44 68.2
Thecc.01G359100 Theobroma cacao HOM05D011433 ORTHO05D013366 8.5e-06 53.1 50 56.0


User provided reference genes

Program Settings