Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G146100 Manihot esculenta HOM05D012645 ORTHO05D011500 4.0e-38 161.0 84 100.0
Manes.14G027000 Manihot esculenta HOM05D012645 ORTHO05D011500 2.5e-24 115.2 88 75.0
Potri.015G139966 Populus trichocarpa HOM05D010814 ORTHO05D011500 3.0e-17 91.7 88 61.4
Potri.012G138200 Populus trichocarpa HOM05D010814 ORTHO05D011500 2.4e-14 82.0 88 56.8
Thecc.03G175000 Theobroma cacao HOM05D012645 ORTHO05D011500 1.3e-12 76.3 80 57.5
Gohir.A12G258500 Gossypium hirsutum HOM05D012645 ORTHO05D011500 1.1e-11 73.2 92 52.2
CiPaw.04G065300 Carya illinoinensis HOM05D012645 ORTHO05D011500 5.4e-11 70.9 87 49.4
Sabra15G0150700 Salix brachista HOM05D015019 ORTHO05D011500 3.5e-10 68.2 83 53.0
CSS0030299 Camellia sinensis var. sinensis HOM05D012645 ORTHO05D010731 6.0e-10 67.4 87 43.7
Gohir.A01G118366 Gossypium hirsutum HOM05D012645 ORTHO05D011500 3.0e-09 65.1 76 50.0
Gohir.A08G100200 Gossypium hirsutum HOM05D012645 ORTHO05D011500 3.0e-09 65.1 76 50.0
Gohir.D08G111100 Gossypium hirsutum HOM05D012645 ORTHO05D011500 3.9e-09 64.7 76 50.0
Gorai.004G119100 Gossypium raimondii HOM05D012645 ORTHO05D011500 3.9e-09 64.7 76 50.0
TPR.G14345 Trifolium pratense HOM05D010814 ORTHO05D011500 3.9e-09 64.7 82 45.1
Manes.14G026900 Manihot esculenta HOM05D015019 ORTHO05D013840 1.5e-08 62.8 88 43.2
Glyma.10G237100 Glycine max HOM05D010814 ORTHO05D011500 3.3e-08 61.6 87 46.0
Phvul.007G068800 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 1.2e-07 59.7 93 45.2
Medtr1g100733 Medicago truncatula HOM05D010814 ORTHO05D011500 2.8e-07 58.5 85 43.5
Gohir.D12G259750 Gossypium hirsutum HOM05D012645 ORTHO05D011500 6.2e-07 57.4 91 44.0
Gorai.008G278200 Gossypium raimondii HOM05D012645 ORTHO05D011500 1.1e-06 56.6 92 43.5
Dinv35204 Davidia involucrata HOM05D061900 ORTHO05D019092 1.8e-06 55.8 65 47.7
Prupe.2G292900 Prunus persica HOM05D016143 ORTHO05D020738 1.8e-06 55.8 90 43.3
Lalb_Chr02g0140971 Lupinus albus HOM05D010814 ORTHO05D011500 2.4e-06 55.5 77 46.8
Thecc.03G175100 Theobroma cacao HOM05D015019 ORTHO05D013840 4.0e-06 54.7 79 46.8


User provided reference genes

Program Settings