Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 1.8e-66 255.8 126 100.0
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 5.4e-55 217.6 118 90.7
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.9e-53 211.8 125 80.0
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.5e-52 208.8 126 80.2
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 2.8e-51 205.3 126 78.6
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.0e-50 203.4 120 80.0
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 1.0e-50 203.4 126 77.8
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.2e-50 201.1 125 79.2
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 5.2e-50 201.1 125 79.2
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 2.6e-49 198.7 123 78.0
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 2.6e-49 198.7 125 73.6
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 5.8e-49 197.6 128 75.8
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 9.8e-49 196.8 128 75.0
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 1.3e-48 196.4 125 74.4
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 4.9e-48 194.5 127 75.6
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.1e-47 193.4 123 74.0
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 1.9e-47 192.6 127 73.2
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 3.2e-47 191.8 126 73.8
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 4.1e-47 191.4 125 74.4
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 4.1e-47 191.4 117 77.8
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 2.7e-46 188.7 125 74.4
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.7e-46 188.7 125 74.4
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.7e-46 188.7 118 78.0
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 4.6e-46 188.0 127 71.7
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.6e-46 188.0 125 74.4
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.0e-45 186.8 125 71.2
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.7e-45 186.0 134 69.4
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.7e-45 186.0 125 72.8
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 2.3e-45 185.7 118 74.6
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 3.0e-45 185.3 125 71.2
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.9e-45 184.9 125 73.6
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 5.0e-45 184.5 134 73.1
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 6.6e-45 184.1 119 73.9
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 6.6e-45 184.1 129 70.5
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 6.6e-45 184.1 125 71.2
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.1e-44 183.3 118 75.4
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 1.1e-44 183.3 128 69.5
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.1e-44 183.3 118 78.8
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.9e-44 182.6 132 68.9
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.3e-44 181.4 125 72.8
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 4.3e-44 181.4 125 70.4
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 4.3e-44 181.4 121 69.4
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 7.3e-44 180.6 125 69.6
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 9.5e-44 180.3 129 66.7
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 9.5e-44 180.3 118 73.7
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.2e-43 179.9 125 71.2
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 1.6e-43 179.5 130 66.2
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.6e-43 179.5 118 70.3
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-42 176.8 118 73.7
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.1e-42 176.8 129 69.8
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 1.4e-42 176.4 116 69.0
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.8e-42 176.0 127 64.6
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.3e-42 175.6 118 74.6
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 2.3e-42 175.6 120 73.3
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 2.3e-42 175.6 139 64.7
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 3.1e-42 175.3 126 73.0
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 5.2e-42 174.5 118 73.7
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 6.8e-42 174.1 119 70.6
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.8e-42 174.1 125 71.2
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 8.9e-42 173.7 120 73.3
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 1.2e-41 173.3 135 66.7
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 1.5e-41 172.9 125 68.8
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 1.5e-41 172.9 123 68.3
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.0e-41 172.6 124 69.4
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 4.4e-41 171.4 153 58.8
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 5.8e-41 171.0 134 62.7
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 7.5e-41 170.6 121 66.1
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 7.5e-41 170.6 125 68.0
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 9.8e-41 170.2 128 68.8
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.3e-40 169.9 123 66.7
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 2.9e-40 168.7 121 67.8
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.9e-40 168.7 136 61.8
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 6.4e-40 167.5 124 66.1
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 6.4e-40 167.5 120 65.8
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 8.3e-40 167.2 120 70.8
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.9e-39 166.0 118 69.5
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.9e-39 166.0 125 64.8
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 3.2e-39 165.2 123 65.0
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 3.2e-39 165.2 118 69.5
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 3.2e-39 165.2 125 68.0
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 5.4e-39 164.5 121 66.9
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 2.1e-38 162.5 118 67.8
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 4.6e-38 161.4 123 65.0
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 8.6e-37 157.1 149 57.7
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.5e-36 156.4 126 64.3
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 4.3e-36 154.8 83 88.0
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 4.3e-36 154.8 119 68.9
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 7.3e-36 154.1 119 68.9
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 9.5e-36 153.7 119 66.4
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 1.6e-35 152.9 120 66.7
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.6e-35 152.9 120 66.7
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 1.6e-35 152.9 120 66.7
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.6e-35 152.9 119 68.1
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 2.8e-35 152.1 119 65.5
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 2.8e-35 152.1 119 68.1
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 3.6e-35 151.8 120 61.7
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 4.7e-35 151.4 119 67.2
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 6.2e-35 151.0 120 61.7
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.4e-34 149.8 119 67.2
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.4e-34 149.8 119 67.2
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.2e-33 146.7 135 59.3
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 7.6e-33 144.1 119 65.5
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 1.3e-29 133.3 129 55.8
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 5.1e-29 131.3 119 55.5
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.9e-28 129.4 127 52.8
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 9.6e-28 127.1 135 51.9
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 4.7e-27 124.8 118 55.9
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.4e-23 111.3 71 71.8
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 9.6e-20 100.5 73 69.9
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.5e-17 93.2 57 75.4
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.3e-16 90.1 125 40.0
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 8.4e-16 87.4 78 59.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 7.1e-15 84.3 113 43.4
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 6.6e-13 77.8 109 40.4
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 7.4e-12 74.3 50 68.0


User provided reference genes

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