Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 7.7e-65 250.4 129 100.0
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 1.9e-47 192.6 127 78.0
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 2.7e-46 188.7 127 75.6
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 8.0e-46 187.2 127 75.6
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.3e-45 185.7 127 74.8
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 2.3e-45 185.7 127 73.2
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 3.0e-45 185.3 127 76.4
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 3.0e-45 185.3 127 71.7
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 5.2e-45 184.5 127 76.4
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 5.2e-45 184.5 127 76.4
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 6.7e-45 184.1 127 73.2
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 8.8e-45 183.7 128 73.4
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.5e-44 183.0 127 73.2
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.0e-44 182.6 127 72.4
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 2.0e-44 182.6 127 74.8
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 3.3e-44 181.8 127 72.4
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 4.4e-44 181.4 128 72.7
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 4.4e-44 181.4 127 73.2
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 5.7e-44 181.0 127 74.0
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 5.7e-44 181.0 127 70.1
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 7.5e-44 180.6 127 71.7
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 1.3e-43 179.9 128 73.4
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 1.7e-43 179.5 123 76.4
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 3.7e-43 178.3 127 71.7
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 3.7e-43 178.3 127 72.4
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 1.8e-42 176.0 123 75.6
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.8e-42 176.0 96 90.6
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 5.3e-42 174.5 125 76.0
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 5.3e-42 174.5 123 77.2
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 7.0e-42 174.1 96 90.6
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 3.5e-41 171.8 127 71.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 3.5e-41 171.8 127 70.9
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 3.5e-41 171.8 121 75.2
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 4.5e-41 171.4 128 71.1
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 5.9e-41 171.0 127 67.7
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 5.9e-41 171.0 102 85.3
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 5.9e-41 171.0 129 68.2
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 7.7e-41 170.6 127 70.9
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 7.7e-41 170.6 96 89.6
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 1.0e-40 170.2 127 68.5
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 1.0e-40 170.2 127 70.9
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 1.3e-40 169.9 127 68.5
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 2.2e-40 169.1 128 75.8
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 2.9e-40 168.7 127 69.3
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.9e-40 168.7 127 66.9
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 5.0e-40 167.9 127 66.9
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 5.0e-40 167.9 128 71.9
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 5.0e-40 167.9 95 88.4
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 6.5e-40 167.5 127 67.7
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 6.5e-40 167.5 127 67.7
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 6.5e-40 167.5 127 72.4
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.1e-39 166.8 127 67.7
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 1.1e-39 166.8 128 72.7
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.1e-39 166.8 95 88.4
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.1e-39 166.8 96 86.5
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 1.1e-39 166.8 127 67.7
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 1.9e-39 166.0 106 79.2
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 2.5e-39 165.6 127 70.1
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 3.2e-39 165.2 94 88.3
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 3.2e-39 165.2 127 66.9
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 4.2e-39 164.9 127 65.4
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.2e-39 164.9 93 89.2
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 5.5e-39 164.5 128 65.6
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 5.5e-39 164.5 96 83.3
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 5.5e-39 164.5 127 67.7
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 5.5e-39 164.5 127 73.2
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 7.2e-39 164.1 94 86.2
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 9.4e-39 163.7 96 84.4
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 1.2e-38 163.3 127 70.9
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.6e-38 162.9 97 83.5
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 6.1e-38 161.0 106 72.6
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 8.0e-38 160.6 94 85.1
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 1.4e-37 159.8 127 63.8
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.4e-37 159.8 91 85.7
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 1.8e-37 159.5 88 87.5
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 1.8e-37 159.5 88 87.5
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 2.3e-37 159.1 127 67.7
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 3.0e-37 158.7 107 75.7
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 3.0e-37 158.7 125 68.8
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 3.0e-37 158.7 127 66.1
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 4.0e-37 158.3 126 68.3
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 6.8e-37 157.5 127 67.7
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 1.5e-36 156.4 130 68.5
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 2.0e-36 156.0 84 92.9
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 3.4e-36 155.2 115 72.2
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 4.4e-36 154.8 127 67.7
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 4.4e-36 154.8 105 72.4
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 4.4e-36 154.8 100 77.0
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 5.7e-36 154.5 103 77.7
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 7.5e-36 154.1 126 66.7
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 9.8e-36 153.7 126 66.7
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 4.8e-35 151.4 126 65.9
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 4.8e-35 151.4 126 65.9
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 8.3e-35 150.6 90 80.0
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 8.3e-35 150.6 93 82.8
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 2.4e-34 149.1 128 64.8
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 2.4e-34 149.1 127 65.4
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 7.0e-34 147.5 92 81.5
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 1.2e-33 146.7 128 64.8
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 2.0e-33 146.0 110 71.8
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 1.0e-32 143.7 94 73.4
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.7e-32 142.9 90 76.7
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 8.8e-29 130.6 89 71.9
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.2e-25 120.2 101 61.4
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 1.0e-24 117.1 78 71.8
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 2.9e-24 115.5 76 72.4
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 2.5e-23 112.5 127 52.0
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 6.1e-22 107.8 105 57.1
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 8.0e-14 80.9 84 50.0
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 7.3e-07 57.8 79 41.8


User provided reference genes

Program Settings