Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 6.6e-197 690.6 382 100.0
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.6e-174 616.3 375 91.5
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 7.3e-172 607.4 383 80.9
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 7.3e-172 607.4 383 80.9
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.2e-171 606.7 384 80.5
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 3.4e-169 598.6 387 85.3
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 6.0e-166 587.8 391 77.2
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.1e-164 583.6 393 84.5
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 2.5e-164 582.4 389 80.5
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 5.3e-162 574.7 390 84.6
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 9.0e-162 573.9 398 81.9
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.0e-161 572.8 381 79.8
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.2e-160 569.3 388 85.8
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 3.8e-160 568.5 391 78.0
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.4e-159 565.8 394 78.2
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 7.1e-159 564.3 393 83.0
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 1.9e-156 556.2 397 80.6
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 9.6e-156 553.9 393 81.2
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 6.2e-155 551.2 400 82.0
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.1e-154 550.4 410 79.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.1e-154 550.4 400 81.0
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.8e-154 549.7 393 82.7
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 5.3e-154 548.1 397 80.4
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 6.9e-154 547.7 396 79.0
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 9.0e-154 547.4 374 83.4
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.6e-153 545.8 396 79.8
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 7.6e-153 544.3 396 80.8
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.2e-152 542.7 377 83.0
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 2.2e-152 542.7 400 78.0
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.8e-152 542.0 406 79.8
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 3.8e-152 542.0 410 80.2
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 2.4e-151 539.3 407 79.4
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 3.2e-151 538.9 365 84.7
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 7.1e-151 537.7 382 81.7
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 7.1e-151 537.7 385 77.7
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 9.3e-151 537.3 393 78.6
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 2.1e-150 536.2 416 74.3
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.3e-149 532.7 419 74.9
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 2.3e-149 532.7 395 80.8
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 1.1e-148 530.4 428 65.4
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 1.9e-148 529.6 410 74.6
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 3.3e-148 528.9 419 73.3
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 3.3e-148 528.9 422 67.8
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 4.3e-148 528.5 411 75.4
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.3e-147 526.9 384 77.3
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 4.8e-147 525.0 405 78.8
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.1e-146 523.9 394 76.1
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 6.9e-146 521.2 407 76.7
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.0e-144 517.3 407 77.6
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 1.7e-144 516.5 403 67.2
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.9e-143 513.1 415 73.0
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 4.2e-143 511.9 407 77.6
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 5.5e-143 511.5 408 67.9
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 9.3e-143 510.8 383 72.3
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.6e-142 508.4 411 73.5
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.9e-141 505.4 407 73.7
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.1e-141 505.0 416 71.9
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 4.3e-140 501.9 398 78.1
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.6e-140 500.7 414 72.0
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 2.8e-139 499.2 425 70.4
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 2.9e-136 489.2 424 69.8
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 2.9e-136 489.2 396 72.5
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 3.2e-135 485.7 395 75.7
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 3.2e-135 485.7 352 70.5
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 4.2e-135 485.3 374 66.3
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 2.1e-134 483.0 395 75.7
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 6.1e-134 481.5 375 65.3
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.3e-132 475.7 381 66.1
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 5.7e-132 474.9 380 70.3
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.8e-130 469.9 427 65.6
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 6.9e-130 468.0 407 67.3
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 6.9e-130 468.0 366 78.7
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 7.7e-129 464.5 375 69.6
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.7e-128 463.4 401 69.1
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 5.0e-128 461.8 399 71.4
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 6.5e-128 461.5 405 64.9
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 6.5e-128 461.5 396 69.2
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.1e-127 460.7 405 70.9
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 3.6e-126 455.7 429 66.2
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 3.6e-126 455.7 409 64.3
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 3.6e-126 455.7 409 64.3
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 4.6e-126 455.3 411 63.3
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 4.6e-126 455.3 411 63.3
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.8e-125 453.4 367 76.0
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 2.3e-125 453.0 405 62.5
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.1e-124 450.7 427 67.7
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 2.0e-124 449.9 404 68.6
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 3.3e-124 449.1 393 66.2
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 2.8e-123 446.0 404 68.3
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 2.8e-123 446.0 404 68.3
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 1.1e-122 444.1 408 67.9
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 1.1e-122 444.1 323 72.8
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 1.4e-122 443.7 310 76.5
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 2.4e-122 443.0 418 61.5
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 1.5e-121 440.3 408 67.6
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 1.3e-120 437.2 345 73.3
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.2e-119 432.2 347 64.6
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 5.5e-119 431.8 474 61.8
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 4.7e-118 428.7 292 83.2
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 1.0e-117 427.6 331 76.7
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 6.7e-117 424.9 396 61.6
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 5.7e-116 421.8 397 62.5
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 7.4e-116 421.4 396 60.1
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.7e-116 421.0 396 64.1
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.7e-116 421.0 397 62.2
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 9.7e-116 421.0 335 71.3
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.7e-115 420.2 372 62.6
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 3.7e-115 419.1 405 61.7
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.5e-113 413.7 364 64.3
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 2.6e-113 412.9 367 61.9
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.6e-113 412.9 395 58.7
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-113 412.5 413 60.5
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 2.9e-112 409.5 386 61.4
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 5.7e-108 395.2 343 59.2
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 8.8e-101 371.3 398 56.8
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 3.5e-97 359.4 392 61.7
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 5.5e-95 352.1 432 49.8
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.0e-93 345.9 347 55.6
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.2e-92 344.4 387 50.1
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 8.3e-91 338.2 378 54.8
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 5.9e-89 332.0 343 50.7
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.5e-87 327.4 170 88.8
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 3.6e-86 322.8 331 50.8
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 5.2e-85 318.9 345 50.1
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 6.4e-83 312.0 180 81.1
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.9e-80 303.1 317 50.8
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 1.9e-79 300.4 373 50.4
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 1.6e-78 297.4 276 71.7
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.4e-77 294.3 274 71.9
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.2e-76 291.2 290 68.3
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 9.8e-76 288.1 263 64.3
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 1.1e-69 268.1 138 90.6
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 9.9e-60 235.0 123 91.9
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.7e-57 226.9 155 77.4
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-55 221.5 120 85.0
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.7e-48 195.3 169 57.4
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 2.1e-46 190.7 113 72.6
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 3.6e-46 189.9 318 38.1
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 7.6e-44 182.2 91 90.1
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 1.6e-41 174.5 146 66.4
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 2.1e-33 147.5 286 35.7
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 4.2e-26 123.2 100 66.0
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.3e-15 86.7 83 48.2
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 3.7e-14 83.6 40 92.5
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 3.6e-09 67.0 60 55.0
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 3.0e-08 63.9 73 46.6


User provided reference genes

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