Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.6e-164 582.8 322 100.0
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 1.5e-133 479.9 328 77.7
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 1.8e-131 473.0 328 76.8
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 9.0e-131 470.7 328 76.5
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.2e-130 470.3 328 76.2
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.3e-129 466.8 328 76.5
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 4.9e-129 464.9 330 75.5
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.1e-128 463.8 330 74.8
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.6e-127 459.9 324 75.6
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.3e-126 456.1 326 74.8
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 3.0e-126 455.7 332 73.2
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 6.7e-126 454.5 332 72.3
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 1.1e-125 453.8 328 72.9
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.1e-125 453.8 325 74.2
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 3.3e-125 452.2 328 72.9
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 3.3e-125 452.2 329 72.6
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 4.3e-125 451.8 320 73.8
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 7.4e-125 451.1 332 72.9
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 9.6e-125 450.7 326 73.6
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.1e-124 449.5 327 72.8
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.1e-124 449.5 330 72.1
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 2.1e-124 449.5 330 71.8
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 3.7e-124 448.7 325 72.6
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 3.7e-124 448.7 326 73.0
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 3.7e-124 448.7 330 71.8
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 4.8e-124 448.4 332 73.5
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 4.8e-124 448.4 323 73.4
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 6.3e-124 448.0 326 72.4
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 1.4e-123 446.8 318 73.9
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 3.1e-123 445.7 325 72.9
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.1e-123 445.7 324 72.8
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 4.1e-123 445.3 324 72.2
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 9.0e-123 444.1 331 73.1
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 9.0e-123 444.1 346 71.4
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 1.5e-122 443.4 325 72.0
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 2.9e-121 439.1 318 73.3
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.4e-120 436.8 307 78.2
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 9.3e-120 434.1 320 71.9
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 2.1e-119 433.0 317 74.8
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 2.1e-119 433.0 331 71.3
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.5e-119 432.2 320 71.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.9e-119 431.0 320 72.2
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 7.9e-119 431.0 325 70.8
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.8e-118 429.9 319 71.2
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.8e-118 429.9 316 72.2
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 5.1e-118 428.3 340 66.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 8.7e-118 427.6 329 68.7
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 5.7e-117 424.9 336 67.3
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 9.7e-117 424.1 277 77.6
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 9.7e-117 424.1 320 70.6
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.3e-116 423.7 328 70.1
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 1.3e-116 423.7 327 68.8
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 2.2e-116 422.9 328 69.8
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.8e-116 422.5 321 71.0
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 4.8e-116 421.8 327 68.5
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.1e-115 420.6 328 68.9
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.4e-115 420.2 325 69.2
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.8e-115 419.9 332 69.3
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 2.4e-115 419.5 325 69.2
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 4.1e-115 418.7 318 73.0
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 6.9e-115 417.9 322 68.3
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 3.4e-114 415.6 328 68.6
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 3.4e-114 415.6 283 77.0
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.3e-113 413.7 277 74.7
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.4e-112 410.2 231 89.6
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.5e-112 409.5 316 67.7
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 5.5e-112 408.3 320 67.8
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 7.2e-112 407.9 316 67.7
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 7.2e-112 407.9 316 67.7
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 9.4e-112 407.5 316 68.0
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.2e-111 407.1 305 69.2
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 1.2e-111 407.1 316 68.0
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.2e-111 407.1 319 67.7
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 1.6e-111 406.8 280 73.9
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 3.6e-111 405.6 320 66.9
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 3.6e-111 405.6 303 70.0
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 6.1e-111 404.8 320 66.9
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 6.1e-111 404.8 319 67.1
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 6.1e-111 404.8 291 75.9
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.0e-110 404.1 322 67.1
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.4e-110 403.7 320 66.6
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 2.3e-110 402.9 323 71.8
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 2.3e-110 402.9 323 71.8
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 3.0e-110 402.5 319 67.7
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 3.9e-110 402.1 319 67.1
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.1e-109 400.6 320 66.9
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 6.3e-108 394.8 328 67.1
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 8.2e-108 394.4 233 84.5
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 2.4e-107 392.9 317 70.0
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 2.0e-106 389.8 320 65.0
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 5.9e-106 388.3 330 69.7
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 7.7e-106 387.9 253 76.7
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 1.9e-104 383.3 330 63.9
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.4e-102 377.1 236 78.8
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 2.0e-101 373.2 290 66.6
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 1.7e-100 370.2 232 79.3
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 5.3e-99 365.2 322 62.4
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 7.7e-98 361.3 316 62.0
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 4.7e-95 352.1 296 60.8
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 1.5e-93 347.1 209 82.8
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 5.3e-91 338.6 269 62.5
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.5e-88 330.5 269 61.3
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 2.1e-87 326.6 321 55.1
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 2.2e-84 316.6 336 57.7
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 2.2e-84 316.6 265 60.8
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 2.8e-84 316.2 264 60.2
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 1.5e-80 303.9 313 57.8
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 1.9e-72 276.9 265 55.1
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.8e-70 270.4 223 68.2
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.4e-62 244.2 238 59.7
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.7e-60 237.3 231 55.8
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 2.5e-56 223.4 198 62.1
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 3.3e-56 223.0 306 45.4
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 3.1e-46 189.9 182 63.2
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.1e-38 164.9 103 71.8
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 2.5e-16 90.5 64 67.2
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.1e-10 70.9 70 47.1
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 2.3e-09 67.4 64 62.5
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.8e-06 57.8 50 60.0


User provided reference genes

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