Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 8.8e-72 273.9 176 100.0
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 3.9e-43 178.7 178 61.2
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 5.0e-43 178.3 178 72.5
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 6.6e-43 177.9 182 74.7
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 2.5e-42 176.0 178 75.8
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 1.8e-40 169.9 178 74.2
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.3e-38 163.7 179 73.7
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 1.7e-38 163.3 175 73.7
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 2.2e-38 162.9 176 71.0
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 1.9e-37 159.8 177 72.3
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 5.4e-37 158.3 178 72.5
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 5.4e-37 158.3 177 73.4
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 1.2e-36 157.1 184 63.6
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.7e-35 153.3 174 62.6
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 3.3e-34 149.1 166 69.9
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 1.6e-33 146.7 184 67.4
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.0e-31 139.8 179 66.5
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 7.6e-31 137.9 176 64.2
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.3e-30 137.1 178 67.4
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-30 136.7 183 66.1
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.7e-30 136.7 183 66.1
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.2e-30 136.3 179 49.2
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 3.8e-30 135.6 180 63.9
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 1.4e-29 133.7 179 62.6
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 7.1e-29 131.3 163 65.0
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 2.7e-28 129.4 174 58.6
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 7.8e-28 127.9 165 67.3
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 1.3e-27 127.1 179 63.7
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 1.7e-27 126.7 182 65.4
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 1.7e-27 126.7 180 65.6
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 1.7e-27 126.7 181 66.3
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 1.7e-27 126.7 177 55.9
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 3.0e-27 125.9 177 54.8
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 3.9e-27 125.6 185 63.8
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 5.1e-27 125.2 178 60.7
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 6.6e-27 124.8 179 65.4
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 8.7e-27 124.4 174 56.9
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 8.7e-27 124.4 177 55.4
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.1e-26 124.0 182 63.7
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 1.1e-26 124.0 174 60.3
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 1.1e-26 124.0 174 60.3
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 1.9e-26 123.2 174 55.2
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 1.9e-26 123.2 176 65.3
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.3e-26 122.5 181 56.9
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 4.3e-26 122.1 177 53.7
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.6e-25 120.2 182 62.6
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.6e-25 119.0 177 64.4
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 6.2e-25 118.2 177 64.4
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.4e-24 117.1 177 45.2
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.4e-24 116.3 177 45.2
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.4e-24 116.3 176 64.8
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.1e-24 115.9 179 48.6
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.0e-24 115.5 179 48.6
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 9.0e-24 114.4 176 58.5
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.0e-23 113.2 179 53.1
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 5.8e-23 111.7 179 45.3
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.8e-23 111.7 179 46.9
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.3e-22 110.5 174 55.7
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 2.9e-22 109.4 176 63.1
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.9e-22 109.4 129 54.3
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 2.9e-22 109.4 178 60.7
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 3.8e-22 109.0 182 62.1
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 8.4e-22 107.8 183 56.3
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 1.4e-21 107.1 175 62.3
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 1.9e-21 106.7 180 58.9
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 1.9e-21 106.7 183 56.8
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.2e-21 105.9 177 46.9
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 3.2e-21 105.9 175 61.1
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 4.2e-21 105.5 190 52.1
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 4.2e-21 105.5 190 57.4
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 4.2e-21 105.5 177 62.1
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 5.4e-21 105.1 179 58.1
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 9.3e-21 104.4 162 40.7
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 9.3e-21 104.4 174 43.7
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 9.3e-21 104.4 175 61.7
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.2e-20 104.0 173 52.6
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.6e-20 103.6 174 54.6
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 2.1e-20 103.2 178 42.7
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 2.7e-20 102.8 178 42.1
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 2.7e-20 102.8 178 42.1
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 2.7e-20 102.8 175 52.6
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 4.6e-20 102.1 175 51.4
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 4.6e-20 102.1 177 62.7
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 6.0e-20 101.7 180 57.8
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 7.8e-20 101.3 122 57.4
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.0e-19 100.9 178 41.6
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.3e-19 100.5 176 50.0
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.7e-19 100.1 175 57.7
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 3.9e-19 99.0 183 57.9
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 5.1e-19 98.6 178 59.0
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 8.7e-19 97.8 175 58.9
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.1e-18 97.4 176 58.5
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 1.5e-18 97.1 183 57.4
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 1.9e-18 96.7 179 60.3
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 5.6e-18 95.1 172 57.6
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 1.3e-17 94.0 254 40.6
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.3e-17 94.0 89 91.0
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.1e-17 93.2 187 54.0
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 2.8e-17 92.8 181 38.7
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 2.8e-17 92.8 193 39.4
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 2.8e-17 92.8 175 40.6
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 2.8e-17 92.8 175 40.6
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 2.8e-17 92.8 175 44.0
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 3.6e-17 92.4 180 39.4
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 3.6e-17 92.4 171 41.5
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 6.2e-17 91.7 120 53.3
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 6.2e-17 91.7 166 55.4
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 6.2e-17 91.7 124 47.6
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 1.1e-16 90.9 175 41.1
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 1.4e-16 90.5 187 38.5
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 1.4e-16 90.5 134 57.5
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.8e-16 90.1 175 56.6
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 2.4e-16 89.7 177 41.2
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 2.4e-16 89.7 177 41.2
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 2.4e-16 89.7 177 41.2
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 1.5e-15 87.0 173 52.0
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 1.5e-15 87.0 134 57.5
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 2.0e-15 86.7 172 38.4
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 2.0e-15 86.7 149 42.3
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 4.5e-15 85.5 155 41.3
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 7.6e-15 84.7 183 50.3
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 9.9e-15 84.3 127 42.5
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.7e-14 83.6 190 36.8
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 2.2e-14 83.2 87 51.7
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 2.2e-14 83.2 125 44.0
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 4.2e-13 79.0 178 55.6
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.2e-12 77.4 172 39.0
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 1.6e-12 77.0 124 47.6
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 4.6e-12 75.5 173 49.1
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 5.1e-11 72.0 131 58.0
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.1e-10 70.9 178 48.3
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 1.9e-10 70.1 174 49.4
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 3.3e-10 69.3 176 32.4
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 5.6e-10 68.6 126 38.9
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 2.2e-06 56.6 69 88.4
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 6.4e-06 55.1 94 63.8
unitig_8.g4035 Utricularia gibba HOM05D005335 ORTHO05D006472 6.4e-06 55.1 127 50.4


User provided reference genes

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