Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.5e-127 459.5 228 100.0
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 7.1e-106 387.5 226 83.2
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 7.3e-103 377.5 228 80.7
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.3e-102 376.7 226 81.9
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 1.6e-102 376.3 226 81.0
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.1e-101 373.6 226 80.5
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.4e-101 373.2 226 81.0
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.4e-101 373.2 226 80.1
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 1.8e-101 372.9 226 80.5
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 2.4e-101 372.5 226 81.4
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.4e-101 372.5 230 82.2
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 2.4e-101 372.5 226 81.4
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 5.3e-101 371.3 226 80.1
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 9.0e-101 370.5 226 81.4
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.4e-100 368.6 226 79.2
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.4e-100 368.6 226 79.2
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 7.6e-100 367.5 226 79.2
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 9.9e-100 367.1 226 80.1
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.7e-99 366.3 228 80.3
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 2.2e-99 365.9 228 79.8
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 4.9e-99 364.8 226 79.6
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 8.4e-99 364.0 228 79.8
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.9e-98 362.8 226 79.2
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 4.2e-98 361.7 226 79.2
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 7.1e-98 360.9 232 76.7
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 7.1e-98 360.9 226 80.1
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 9.3e-98 360.5 226 78.3
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 1.6e-97 359.8 228 79.8
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 2.1e-97 359.4 227 79.3
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 2.7e-97 359.0 227 78.9
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.7e-97 359.0 226 78.3
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.5e-97 358.6 228 79.8
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 4.6e-97 358.2 226 77.9
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 6.0e-97 357.8 230 77.4
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.0e-96 357.1 226 78.8
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 1.0e-96 357.1 226 77.9
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.3e-96 356.7 226 78.3
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 2.3e-96 355.9 226 76.5
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 5.1e-96 354.8 252 72.2
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 6.7e-96 354.4 226 76.1
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.1e-95 353.6 227 75.8
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.5e-95 353.2 224 77.7
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.5e-95 353.2 226 77.0
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.9e-95 352.8 224 77.2
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 4.3e-95 351.7 227 77.1
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 5.6e-95 351.3 226 77.0
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 7.4e-95 350.9 226 75.7
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 9.6e-95 350.5 226 76.1
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 9.6e-95 350.5 224 76.8
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 1.6e-94 349.7 227 76.2
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 3.7e-94 348.6 225 76.0
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 4.8e-94 348.2 225 76.9
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 4.8e-94 348.2 225 77.3
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.4e-93 346.7 232 74.1
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 1.8e-93 346.3 234 75.2
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 2.4e-93 345.9 229 76.0
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 3.1e-93 345.5 225 76.0
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 3.1e-93 345.5 225 76.0
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 3.1e-93 345.5 228 75.4
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 4.0e-93 345.1 233 73.8
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 4.0e-93 345.1 225 76.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 4.0e-93 345.1 225 76.0
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 1.5e-92 343.2 227 73.6
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.5e-92 343.2 228 74.1
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 2.0e-92 342.8 225 75.6
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 2.0e-92 342.8 212 79.7
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.0e-92 342.8 225 73.8
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.0e-92 342.8 225 73.8
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 2.6e-92 342.4 244 71.3
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 5.8e-92 341.3 228 73.7
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.0e-91 340.5 234 73.9
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 2.9e-91 339.0 228 74.1
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 6.4e-91 337.8 229 73.4
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 1.1e-90 337.0 237 71.3
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 5.5e-90 334.7 210 79.5
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 7.1e-90 334.3 209 79.4
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.2e-89 333.6 247 68.4
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 2.1e-89 332.8 226 76.1
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 3.5e-89 332.0 227 70.9
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 1.8e-88 329.7 231 70.6
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 2.3e-88 329.3 261 64.8
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 3.0e-88 328.9 230 70.9
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 3.9e-88 328.6 210 76.2
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 7.4e-87 324.3 215 74.4
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.1e-85 320.5 211 73.9
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 5.3e-85 318.2 209 74.6
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 4.5e-84 315.1 212 75.0
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 5.8e-84 314.7 230 72.2
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.0e-83 313.9 223 71.3
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 2.5e-82 309.3 239 65.3
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 5.5e-82 308.1 236 69.1
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 7.1e-82 307.8 226 69.5
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 1.6e-81 306.6 231 66.2
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 1.1e-77 293.9 210 73.3
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 2.2e-75 286.2 226 65.0
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.4e-74 283.5 152 87.5
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.9e-74 283.1 177 80.2
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 5.7e-71 271.6 190 68.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.2e-70 269.6 174 70.1
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 8.2e-70 267.7 226 61.9
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 3.1e-69 265.8 238 58.4
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.0e-67 260.8 224 64.3
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 6.1e-65 251.5 229 58.5
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 1.5e-63 246.9 332 46.1
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 7.4e-63 244.6 147 78.2
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 2.4e-61 239.6 157 75.8
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 2.0e-60 236.5 226 55.8
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.7e-59 233.4 123 86.2
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 6.5e-59 231.5 145 80.7
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 3.6e-57 225.7 168 60.1
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 3.8e-51 205.7 163 59.5
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 3.8e-43 179.1 178 51.7
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 5.2e-40 168.7 134 59.7
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 7.5e-39 164.9 159 49.7
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 3.2e-29 132.9 63 95.2
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.6e-25 119.4 86 64.0
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.3e-24 116.7 91 65.9
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.1e-24 116.3 68 83.8
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.1e-24 116.3 63 79.4
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 7.5e-23 111.7 118 52.5
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 4.1e-21 105.9 142 43.7


User provided reference genes

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