Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G112400 Manihot esculenta HOM05D007617 ORTHO05D007195 1.9e-69 265.8 139 100.0
Manes.14G057300 Manihot esculenta HOM05D007617 ORTHO05D007195 2.9e-41 172.2 137 68.6
Potri.012G090700 Populus trichocarpa HOM05D007617 ORTHO05D007195 3.0e-22 109.0 150 48.0
Thecc.03G118700 Theobroma cacao HOM05D011792 ORTHO05D007195 1.4e-16 90.1 103 55.3
Ciclev10022896m.g Citrus clementina HOM05D007617 ORTHO05D007195 7.8e-15 84.3 137 46.7
Aqoxy5G03650 Aquilegia oxysepala HOM05D007617 ORTHO05D007195 1.3e-14 83.6 145 42.1
MD06G1161600 Malus domestica HOM05D007617 ORTHO05D007195 1.1e-13 80.5 145 44.1
TAR374G0075 Trochodendron aralioides HOM05D007617 ORTHO05D007195 7.3e-13 77.8 145 41.4
QL02p073546 Quercus lobata HOM05D007617 ORTHO05D007195 1.3e-12 77.0 140 45.0
Sed0018064 Sechium edule HOM05D007617 ORTHO05D007195 2.8e-12 75.9 145 43.4
RcHm_v2.0_Chr7g0191931 Rosa chinensis HOM05D007617 ORTHO05D007195 3.6e-12 75.5 139 43.9
CANSAT64G0294 Cannabis sativa HOM05D007617 ORTHO05D007195 6.2e-12 74.7 67 64.2
Atru.chr9.1807 Acer truncatum HOM05D007617 ORTHO05D007195 1.1e-11 73.9 140 44.3
FvH4_5g06710 Fragaria vesca HOM05D007617 ORTHO05D007195 1.4e-11 73.6 142 43.7
FAN08G2040 Fragaria x ananassa HOM05D007617 ORTHO05D007195 5.3e-11 71.6 142 43.0
Hma1.2p1_0818F.1_g223400 Hydrangea macrophylla HOM05D007617 ORTHO05D007195 5.3e-11 71.6 148 41.2
Lalb_Chr21g0317701 Lupinus albus HOM05D007617 ORTHO05D007195 5.3e-11 71.6 145 40.0
Prupe.3G296000 Prunus persica HOM05D007617 ORTHO05D007195 6.9e-11 71.2 141 41.8
Haze_07632 Corylus avellana HOM05D007617 ORTHO05D007195 9.0e-11 70.9 150 39.3
FAN18G3066 Fragaria x ananassa HOM05D007617 ORTHO05D007195 9.0e-11 70.9 142 43.0
TWI39G0914 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 9.0e-11 70.9 138 39.9
FAN13G2538 Fragaria x ananassa HOM05D007617 ORTHO05D007195 1.2e-10 70.5 142 43.0
Lsat_1_v5_gn_2_91001 Lactuca sativa HOM05D007617 ORTHO05D007195 1.2e-10 70.5 140 40.7
Lsat_1_v5_gn_2_94241 Lactuca sativa HOM05D007617 ORTHO05D007195 1.5e-10 70.1 140 41.4
Sopen02g038090 Solanum pennellii HOM05D007617 ORTHO05D007195 2.0e-10 69.7 83 51.8
Gohir.D07G059400 Gossypium hirsutum HOM05D011792 ORTHO05D007195 2.6e-10 69.3 152 40.1
Lalb_Chr02g0158101 Lupinus albus HOM05D007617 ORTHO05D007195 3.4e-10 68.9 138 36.2
PGSC0003DMG400012616 Solanum tuberosum HOM05D007617 ORTHO05D007195 3.4e-10 68.9 85 51.8
vmacro18302 Vaccinium macrocarpon HOM05D007617 ORTHO05D007195 3.4e-10 68.9 145 42.8
Prupe.5G161500 Prunus persica HOM05D007617 ORTHO05D007195 7.6e-10 67.8 147 39.5
Glyma.19G053100 Glycine max HOM05D007617 ORTHO05D007195 9.9e-10 67.4 138 37.7
Gohir.A07G055100 Gossypium hirsutum HOM05D011792 ORTHO05D007195 9.9e-10 67.4 152 40.8
TPR.G31739 Trifolium pratense HOM05D007617 ORTHO05D007195 9.9e-10 67.4 139 37.4
DCAR_011273 Daucus carota HOM05D007617 ORTHO05D007195 2.9e-09 65.9 137 40.1
Gorai.001G062900 Gossypium raimondii HOM05D011792 ORTHO05D007195 2.9e-09 65.9 152 39.5
MD02G1049300 Malus domestica HOM05D007617 ORTHO05D007195 3.8e-09 65.5 144 40.3
ATR1145G009 Amborella trichopoda HOM05D007617 ORTHO05D007195 4.9e-09 65.1 70 55.7
FAN04G0785 Fragaria x ananassa HOM05D007617 ORTHO05D007195 4.9e-09 65.1 136 41.9
Atru.chr6.2453 Acer truncatum HOM05D007617 ORTHO05D007195 6.4e-09 64.7 147 38.8
QL10p005918 Quercus lobata HOM05D007617 ORTHO05D007195 6.4e-09 64.7 149 41.6
Ciclev10017789m.g Citrus clementina HOM05D007617 ORTHO05D007195 8.4e-09 64.3 149 38.9
Psat6g179560 Pisum sativum HOM05D007617 ORTHO05D007195 8.4e-09 64.3 140 36.4
TAR371G0337 Trochodendron aralioides HOM05D007617 ORTHO05D007195 8.4e-09 64.3 145 39.3
MSTRG.549 Avicennia marina HOM05D007617 ORTHO05D007195 1.1e-08 63.9 102 43.1
CANSAT80G0013 Cannabis sativa HOM05D007617 ORTHO05D007195 1.1e-08 63.9 152 39.5
Glyma.05G114700 Glycine max HOM05D007617 ORTHO05D007195 1.1e-08 63.9 136 36.8
Medtr1g093790 Medicago truncatula HOM05D007617 ORTHO05D007195 1.4e-08 63.5 140 37.9
Sopen02g017030 Solanum pennellii HOM05D007617 ORTHO05D007195 1.4e-08 63.5 138 39.1
TWI23G0333 Tripterygium wilfordii HOM05D007617 ORTHO05D007195 1.4e-08 63.5 138 37.0
CiPaw.11G014400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.9e-08 63.2 149 37.6
Duzib205G1108 Durio zibethinus HOM05D011792 ORTHO05D007195 3.2e-08 62.4 149 37.6
Lj2g0010313 Lotus japonicus HOM05D007617 ORTHO05D007195 3.2e-08 62.4 143 36.4
Phvul.004G059700 Phaseolus vulgaris HOM05D007617 ORTHO05D007195 3.2e-08 62.4 146 37.0
Nn4g22527 Nelumbo nucifera HOM05D007617 ORTHO05D007195 4.2e-08 62.0 78 52.6
Nitab4.5_0004496g0030 Nicotiana tabacum HOM05D007617 ORTHO05D007195 4.2e-08 62.0 136 38.2
Solyc02g067910.1 Solanum lycopersicum HOM05D007617 ORTHO05D007195 4.2e-08 62.0 138 38.4
Thhalv10010898m.g Eutrema salsugineum HOM05D010525 ORTHO05D007195 5.4e-08 61.6 116 39.7
Nitab4.5_0000040g0620 Nicotiana tabacum HOM05D007617 ORTHO05D007195 5.4e-08 61.6 67 55.2
Dinv33408 Davidia involucrata HOM05D007617 ORTHO05D007195 1.2e-07 60.5 134 41.8
Nn3g16639 Nelumbo nucifera HOM05D007617 ORTHO05D007195 1.6e-07 60.1 77 55.8
BcaB01g00826 Brassica carinata HOM05D010525 ORTHO05D007195 2.1e-07 59.7 118 42.4
VMungo0464G0279 Vigna mungo HOM05D007617 ORTHO05D007195 2.1e-07 59.7 141 39.0
EL10As2g23175 Beta vulgaris HOM05D007617 ORTHO05D007195 2.7e-07 59.3 137 36.5
Hund06047 Selenicereus undatus HOM05D007617 ORTHO05D007195 2.7e-07 59.3 132 34.8
Gohir.D12G189700 Gossypium hirsutum HOM05D011792 ORTHO05D007195 3.5e-07 58.9 138 35.5
MD14G1167200 Malus domestica HOM05D007617 ORTHO05D007195 4.6e-07 58.5 132 36.4
AL8G40240 Arabidopsis lyrata HOM05D010525 ORTHO05D007195 6.0e-07 58.2 140 37.1
PGR142G0897 Punica granatum HOM05D007617 ORTHO05D007195 6.0e-07 58.2 67 53.7
CAN.G1057.14 Capsicum annuum HOM05D007617 ORTHO05D007195 7.9e-07 57.8 138 36.2
Sp5g13710 Schrenkiella parvula HOM05D010525 ORTHO05D007195 7.9e-07 57.8 70 48.6
CiPaw.03G047400 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.3e-06 57.0 137 40.1
CiPaw.09G026700 Carya illinoinensis HOM05D007617 ORTHO05D007195 1.3e-06 57.0 137 40.1
Oeu023836.1 Olea europaea HOM05D007617 ORTHO05D007195 1.3e-06 57.0 90 44.4
Cc07_g00130 Coffea canephora HOM05D007617 ORTHO05D007195 1.7e-06 56.6 144 37.5
ClCG05G013140 Citrullus lanatus HOM05D007617 ORTHO05D007195 3.0e-06 55.8 127 36.2
CARHR276990 Cardamine hirsuta HOM05D010525 ORTHO05D007195 3.9e-06 55.5 102 39.2
Manes.15G153500 Manihot esculenta HOM05D007617 ORTHO05D007195 3.9e-06 55.5 148 36.5
Potri.001G340100 Populus trichocarpa HOM05D007617 ORTHO05D007195 3.9e-06 55.5 139 36.7
BcaC07g39315 Brassica carinata HOM05D010525 ORTHO05D007195 6.6e-06 54.7 68 52.9
C08p23300 Brassica napus HOM05D010525 ORTHO05D007195 6.6e-06 54.7 68 52.9
BolC8t49961H Brassica oleracea HOM05D010525 ORTHO05D007195 6.6e-06 54.7 68 52.9
Cfa007314 Carpinus fangiana HOM05D000615 ORTHO05D007195 8.7e-06 54.3 141 38.3


User provided reference genes

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