Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G109550 Manihot esculenta HOM05D000388 ORTHO05D249771 3.0e-40 167.9 77 100.0
Ah.10g027560 Amaranthus hybridus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
AL2G20770 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
AL2G21380 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
ATCG00350 Arabidopsis thaliana HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.19IRZ6 Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.3I3T69 Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.7VZ02V Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.LRX729 Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.N9CG9C Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.R5AFBV Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.RQ6CA8 Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.VEFJ45 Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.WNC9JI Arachis hypogaea HOM05D000216 ORTHO05D001131 4.8e-06 54.3 29 82.8
arahy.Tifrunner.gnm1.ann1.XV4MRE Arachis hypogaea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
EL10As12g24020 Beta vulgaris HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
A06p23280 Brassica napus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BNapus_Darmor_BZH_scaffold_253p00130 Brassica napus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BNapus_Darmor_BZH_scaffold_287p00040 Brassica napus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
C09p29530 Brassica napus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
C09p40470 Brassica napus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BolSC29t60456H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BolSC29t60578H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BolSC45t60944H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BolSC46t61044H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BolSC47t61107H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BolSC49t61192H Brassica oleracea HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BraA06t25431Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BraSC140t45580Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BraSC151t45707Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BraSC179t45798Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BraSC25t45838Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
BraSC25t45877Z Brassica rapa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CAN.G1183.8 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CAN.G1321.10 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CAN.G1478.13 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CAN.G1738.1 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CAN.G511.1 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CAN.G584.13 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CAN.G653.4 Capsicum annuum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CARHR282010 Cardamine hirsuta HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Cfa021578 Carpinus fangiana HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Ciclev10004112m.g Citrus clementina HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Ciclev10030467m.g Citrus clementina HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
DCAR_032484 Daucus carota HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Dinv29305 Davidia involucrata HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
ECA054G0002 Erigeron canadensis HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
ECA077G0005 Erigeron canadensis HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Thhalv10011033m.g Eutrema salsugineum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Thhalv10022971m.g Eutrema salsugineum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
FvH4_3g21080 Fragaria vesca HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Gohir.D09G124466 Gossypium hirsutum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr00c0300g0573301 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr00c0439g0574771 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr02g0051011 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr04g0099351 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr05g0130081 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr07g0201041 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr08g0210271 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr10g0289181 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr11g0326701 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr14g0430901 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQChr15g0480711 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hma1.2p1_0248F.1_g102140 Hydrangea macrophylla HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lsat_1_v5_gn_1_88121 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lsat_1_v5_gn_4_147740 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lsat_1_v5_gn_7_38301 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lsat_1_v5_gn_8_105461 Lactuca sativa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lj2A1239T200 Lonicera japonica HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lj2C1237G32 Lonicera japonica HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lj2C1239T9 Lonicera japonica HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
LjContig00318g0020224 Lotus japonicus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lalb_Chr01g0015101 Lupinus albus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Lalb_Chr24g0400861 Lupinus albus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Medtr0002s0580 Medicago truncatula HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Medtr3g035600 Medicago truncatula HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Medtr4g051177 Medicago truncatula HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Nn055s41932 Nelumbo nucifera HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Nn1g01320 Nelumbo nucifera HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
PSO548G0063 Papaver somniferum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Potri.013G141912 Populus trichocarpa HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
PGR111G0058 Punica granatum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
QL93p0270_0013 Quercus lobata HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
QL93p2019_0006 Quercus lobata HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
RhsimPtG0004100 Rhododendron simsii HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
RcHm_v2.0_CPg0502251 Rosa chinensis HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
SabraPtG0002300 Salix brachista HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
SalBow1G5459 Salvia bowleyana HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Sed0000383 Sechium edule HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Sed0004796 Sechium edule HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Sed0023791 Sechium edule HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund08564 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund17622 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund18039 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund19312 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund24076 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund25932 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27449 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27565 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27605 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27659 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27667 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27702 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27747 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27760 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27802 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27843 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27870 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund27913 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28001 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28022 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28029 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28055 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28088 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28095 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28120 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28136 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28157 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28165 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28192 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28205 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28241 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28250 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28283 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28295 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28339 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28348 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28356 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28369 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28382 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28394 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28410 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28443 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28497 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28552 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28581 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28621 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28645 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28683 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28694 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28699 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28718 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund28728 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29030 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29056 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29135 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29410 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29447 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29625 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29674 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29777 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29905 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund29947 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Hund30192 Selenicereus undatus HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Sc06g0004330 Simmondsia chinensis HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Solyc00g500057.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Solyc00g500209.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Solyc09g015300.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
SGA_v2.0_scaffold781G53595 Striga asiatica HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
unitig_87.g27944 Utricularia gibba HOM05D000388 ORTHO05D004888 4.8e-06 54.3 29 82.8
unitig_91.g26503 Utricularia gibba HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Zm00001eb087480 Zea mays HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Zm00001eb435010 Zea mays HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Zm00001eb435230 Zea mays HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Zm00001eb435430 Zea mays HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Zm00001eb435690 Zea mays HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
Zm00001eb437210 Zea mays HOM05D000388 ORTHO05D000473 4.8e-06 54.3 29 82.8
CDE06G0970 Ceratophyllum demersum HOM05D000388 ORTHO05D000473 8.2e-06 53.5 29 79.3


User provided reference genes

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