Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 1.4e-86 323.2 195 100.0
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 3.0e-60 235.7 197 77.2
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.1e-59 233.8 198 78.3
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 2.5e-59 232.6 198 79.3
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 7.3e-59 231.1 196 77.0
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 3.6e-58 228.8 197 77.2
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 3.6e-58 228.8 197 77.2
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 2.3e-57 226.1 197 74.1
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 1.2e-56 223.8 189 77.8
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 2.0e-56 223.0 199 74.9
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 3.7e-55 218.8 195 71.3
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 4.9e-55 218.4 202 71.8
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 2.4e-54 216.1 197 72.6
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 4.1e-54 215.3 196 71.4
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 7.0e-54 214.5 196 72.4
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 7.0e-54 214.5 191 73.3
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 7.8e-53 211.1 177 76.8
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 1.3e-52 210.3 197 72.6
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.7e-52 209.9 196 73.5
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 2.3e-52 209.5 202 69.8
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 5.0e-52 208.4 195 70.8
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 8.6e-52 207.6 192 71.9
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 1.5e-51 206.8 202 70.3
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 1.5e-51 206.8 198 71.7
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 2.5e-51 206.1 159 82.4
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 2.5e-51 206.1 205 69.8
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 5.6e-51 204.9 177 75.1
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 5.6e-51 204.9 195 70.3
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 7.3e-51 204.5 196 71.9
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 2.8e-50 202.6 175 75.4
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 3.6e-50 202.2 202 70.8
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 3.6e-50 202.2 195 69.7
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 1.4e-49 200.3 172 76.2
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 1.4e-49 200.3 192 68.8
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 2.3e-49 199.5 192 68.2
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 2.3e-49 199.5 192 68.2
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 3.1e-49 199.1 195 69.2
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 6.8e-49 198.0 163 79.1
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 6.8e-49 198.0 192 68.8
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 8.9e-49 197.6 167 77.8
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.2e-48 197.2 163 78.5
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 1.5e-48 196.8 180 71.1
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 2.0e-48 196.4 189 67.7
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 2.6e-48 196.1 173 73.4
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 3.4e-48 195.7 185 71.4
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 5.8e-48 194.9 173 74.6
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 7.5e-48 194.5 196 65.3
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 1.7e-47 193.4 194 68.6
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 3.7e-47 192.2 159 78.6
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 2.4e-46 189.5 149 81.2
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 3.2e-46 189.1 154 79.9
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 5.4e-46 188.3 189 66.1
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 5.4e-46 188.3 171 73.7
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 9.2e-46 187.6 199 67.3
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 9.2e-46 187.6 154 79.9
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 9.2e-46 187.6 201 65.2
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 2.7e-45 186.0 146 83.6
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 2.7e-45 186.0 197 67.5
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 2.7e-45 186.0 195 66.2
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 3.5e-45 185.7 204 63.7
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 3.5e-45 185.7 194 64.4
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 3.5e-45 185.7 194 64.4
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.3e-44 183.7 195 66.7
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.7e-44 183.3 152 79.6
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 3.0e-44 182.6 202 66.3
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 3.9e-44 182.2 189 68.3
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 6.6e-44 181.4 182 68.7
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.1e-43 180.6 196 65.3
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.1e-43 180.6 194 66.0
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 1.9e-43 179.9 201 65.7
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 3.3e-43 179.1 196 64.8
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 3.3e-43 179.1 188 65.4
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 4.3e-43 178.7 195 61.5
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 7.3e-43 177.9 182 67.6
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 7.3e-43 177.9 150 77.3
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 9.5e-43 177.6 158 74.7
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 9.5e-43 177.6 158 74.7
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 1.2e-42 177.2 148 77.7
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 1.2e-42 177.2 182 67.6
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 1.2e-42 177.2 195 63.1
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 1.6e-42 176.8 202 64.4
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 1.6e-42 176.8 202 64.4
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 2.1e-42 176.4 196 60.2
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 3.6e-42 175.6 201 62.7
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 3.6e-42 175.6 149 79.2
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 4.7e-42 175.3 174 69.5
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 6.2e-42 174.9 202 63.4
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 1.1e-41 174.1 193 62.2
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 1.4e-41 173.7 181 66.3
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 1.2e-40 170.6 182 65.4
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 1.2e-40 170.6 196 61.7
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 1.2e-40 170.6 167 68.3
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 2.0e-40 169.9 192 61.5
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 2.6e-40 169.5 182 65.4
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 2.6e-40 169.5 202 62.9
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 3.4e-40 169.1 194 61.3
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 5.8e-40 168.3 156 73.1
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 9.9e-40 167.5 170 68.2
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 1.7e-39 166.8 159 71.7
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 2.2e-39 166.4 195 58.5
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 1.4e-38 163.7 157 70.7
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 3.2e-38 162.5 196 58.2
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 6.0e-37 158.3 201 59.7
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 3.6e-34 149.1 134 74.6
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 1.8e-33 146.7 197 54.8
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 9.9e-32 141.0 201 54.2
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.3e-28 130.6 161 57.1
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 1.7e-28 130.2 105 61.9
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.5e-27 126.3 195 53.3
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 6.9e-25 118.2 159 55.3
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 1.2e-24 117.5 162 54.3
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 6.0e-21 105.1 164 51.2
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 8.7e-20 101.3 146 54.1
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.1e-19 100.9 112 64.3
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 2.5e-19 99.8 127 52.0
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 1.5e-16 90.5 99 53.5
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 2.2e-15 86.7 140 53.6
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 1.4e-14 84.0 110 53.6
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 3.2e-14 82.8 156 46.2
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 9.3e-14 81.3 114 52.6
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 5.8e-08 62.0 161 41.0


User provided reference genes

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