Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G096000 Manihot esculenta HOM05D006304 ORTHO05D008584 0.0e+00 1260.7 631 100.0
Potri.015G064600 Populus trichocarpa HOM05D006304 ORTHO05D008584 1.7e-178 630.2 692 56.1
GSVIVG01008051001 Vitis vinifera HOM05D006304 ORTHO05D008584 4.0e-167 592.4 723 51.7
MD14G1195600 Malus domestica HOM05D006304 ORTHO05D008584 5.3e-167 592.0 787 48.9
Ciclev10019215m.g Citrus clementina HOM05D006304 ORTHO05D008584 3.4e-166 589.3 698 52.1
Sabra15G0090300 Salix brachista HOM05D006304 ORTHO05D008584 1.3e-165 587.4 691 54.1
FvH4_5g15410 Fragaria vesca HOM05D006304 ORTHO05D008584 2.2e-165 586.6 743 50.9
Cpa.g.sc17.206 Carica papaya HOM05D006304 ORTHO05D008584 9.3e-164 581.3 825 46.8
RcHm_v2.0_Chr7g0180671 Rosa chinensis HOM05D006304 ORTHO05D008584 1.5e-161 573.9 779 48.3
Cfa018983 Carpinus fangiana HOM05D006304 ORTHO05D008584 1.1e-159 567.8 903 44.3
Sed0028137 Sechium edule HOM05D006304 ORTHO05D008584 4.0e-159 565.8 780 47.2
Prupe.5G187100 Prunus persica HOM05D006304 ORTHO05D008584 2.2e-157 560.1 822 46.4
Gorai.008G191000 Gossypium raimondii HOM05D006304 ORTHO05D008584 3.2e-156 556.2 668 52.1
MELO3C002204.2 Cucumis melo HOM05D006304 ORTHO05D008584 7.1e-156 555.1 890 43.5
Gohir.D12G178452 Gossypium hirsutum HOM05D006304 ORTHO05D008584 7.9e-155 551.6 689 50.8
CsaV3_1G007890 Cucumis sativus L. HOM05D006304 ORTHO05D008584 3.0e-154 549.7 890 42.6
Duzib205G0644 Durio zibethinus HOM05D006304 ORTHO05D008584 3.0e-154 549.7 760 47.9
Gohir.A12G175370 Gossypium hirsutum HOM05D006304 ORTHO05D008584 3.0e-154 549.7 757 48.9
MD06G1188800 Malus domestica HOM05D006304 ORTHO05D008584 1.9e-153 547.0 783 46.6
FAN04G3159 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.5e-153 546.6 732 48.9
Oeu048746.1 Olea europaea HOM05D006304 ORTHO05D008584 1.3e-152 544.3 790 45.8
FAN08G3028 Fragaria x ananassa HOM05D006304 ORTHO05D008584 2.1e-152 543.5 721 49.2
CANSAT80G1066 Cannabis sativa HOM05D006304 ORTHO05D008584 1.8e-151 540.4 753 48.5
Atru.chr9.2307 Acer truncatum HOM05D006304 ORTHO05D008584 2.9e-149 533.1 653 50.8
TWI60G1649 Tripterygium wilfordii HOM05D006304 ORTHO05D008584 8.4e-149 531.6 800 46.4
CiPaw.11G039300 Carya illinoinensis HOM05D006304 ORTHO05D008584 3.2e-148 529.6 476 62.6
FAN18G3228 Fragaria x ananassa HOM05D006304 ORTHO05D008584 3.2e-148 529.6 775 46.7
Rhsim12G0159100 Rhododendron simsii HOM05D006304 ORTHO05D008584 3.2e-148 529.6 897 41.4
Medtr4g107890 Medicago truncatula HOM05D006304 ORTHO05D008584 1.3e-146 524.2 748 45.5
Phvul.003G192300 Phaseolus vulgaris HOM05D006304 ORTHO05D008584 5.6e-145 518.8 767 46.0
Thecc.03G080300 Theobroma cacao HOM05D006304 ORTHO05D008584 9.6e-145 518.1 680 49.6
VMungo1215G2961 Vigna mungo HOM05D006304 ORTHO05D008584 1.3e-144 517.7 704 49.3
Lj4g0004911 Lotus japonicus HOM05D006304 ORTHO05D008584 4.8e-144 515.8 747 45.4
TAR371G0034 Trochodendron aralioides HOM05D006304 ORTHO05D008584 4.8e-144 515.8 543 55.2
Nn3g17140 Nelumbo nucifera HOM05D006304 ORTHO05D008584 6.2e-144 515.4 486 59.7
TAR629G0077 Trochodendron aralioides HOM05D006304 ORTHO05D008584 1.4e-143 514.2 518 58.1
arahy.Tifrunner.gnm1.ann1.E16Z9R Arachis hypogaea HOM05D006304 ORTHO05D008584 2.4e-143 513.5 778 45.5
Glyma.17G097500 Glycine max HOM05D006304 ORTHO05D008584 3.1e-143 513.1 730 45.9
Glyma.05G029400 Glycine max HOM05D006304 ORTHO05D008584 5.3e-143 512.3 720 46.1
Haze_07372 Corylus avellana HOM05D006304 ORTHO05D008584 8.4e-141 505.0 901 41.1
Dinv38671 Davidia involucrata HOM05D006304 ORTHO05D008584 1.6e-139 500.7 491 58.7
Psat4g053720 Pisum sativum HOM05D006304 ORTHO05D008584 3.5e-139 499.6 484 59.1
Actinidia34979 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.3e-138 496.9 668 49.3
THA.LOC104821457 Tarenaya hassleriana HOM05D006304 ORTHO05D008584 1.9e-137 493.8 708 46.0
Sp2g25930 Schrenkiella parvula HOM05D006304 ORTHO05D008584 2.5e-137 493.4 702 46.7
Thhalv10003777m.g Eutrema salsugineum HOM05D006304 ORTHO05D008584 3.3e-137 493.0 701 46.5
Ca_21844_v3 Cicer arietinum L. HOM05D006304 ORTHO05D008584 4.3e-137 492.7 493 57.2
vmacro16566 Vaccinium macrocarpon HOM05D006304 ORTHO05D008584 9.7e-137 491.5 935 39.7
CAN.G628.40 Capsicum annuum HOM05D006304 ORTHO05D008584 2.2e-136 490.3 814 42.8
MBI12_g19403_MAGBIO Magnolia biondii HOM05D006304 ORTHO05D008584 3.7e-136 489.6 493 56.8
TPR.G38415 Trifolium pratense HOM05D006304 ORTHO05D008584 6.3e-136 488.8 694 46.5
ClCG01G014430 Citrullus lanatus HOM05D006304 ORTHO05D008584 1.8e-135 487.3 989 38.3
AT5G62760 Arabidopsis thaliana HOM05D006304 ORTHO05D008584 2.4e-135 486.9 671 47.2
Migut.I00131 Erythranthe guttata HOM05D006304 ORTHO05D008584 2.4e-135 486.9 777 42.7
PGR083G1524 Punica granatum HOM05D006304 ORTHO05D008584 9.0e-135 485.0 777 43.0
EL10Ac5g10949 Beta vulgaris HOM05D006304 ORTHO05D008584 1.5e-134 484.2 656 48.2
Sc10g0009990 Simmondsia chinensis HOM05D006304 ORTHO05D008584 2.6e-134 483.4 861 40.5
COL.COLO4_05911 Corchorus olitorius HOM05D006304 ORTHO05D008584 3.4e-134 483.0 670 47.3
Cc04_g15450 Coffea canephora HOM05D006304 ORTHO05D008584 7.7e-134 481.9 554 53.8
FAN13G0685 Fragaria x ananassa HOM05D006304 ORTHO05D008584 1.0e-133 481.5 733 45.7
Nitab4.5_0000269g0180 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.7e-133 480.7 820 43.0
Carub.0008s2349 Capsella rubella HOM05D006304 ORTHO05D008584 5.0e-133 479.2 679 47.0
AUR62008366 Chenopodium quinoa HOM05D006304 ORTHO05D008584 3.2e-132 476.5 912 39.7
Hund09367 Selenicereus undatus HOM05D006304 ORTHO05D008584 1.6e-131 474.2 941 38.8
AUR62021733 Chenopodium quinoa HOM05D006304 ORTHO05D008584 1.4e-130 471.1 915 39.5
Sopen06g027340 Solanum pennellii HOM05D006304 ORTHO05D008584 3.0e-130 469.9 862 40.4
Eucgr.B00434 Eucalyptus grandis HOM05D006304 ORTHO05D008584 1.1e-129 468.0 824 41.3
CARHR276550 Cardamine hirsuta HOM05D006304 ORTHO05D008584 1.5e-129 467.6 670 44.8
BcaB02g09690 Brassica carinata HOM05D006304 ORTHO05D008584 2.0e-129 467.2 652 47.2
Lj5A115T69 Lonicera japonica HOM05D006304 ORTHO05D008584 3.3e-129 466.5 637 49.5
Aqoxy3G00750 Aquilegia oxysepala HOM05D006304 ORTHO05D008584 4.3e-129 466.1 799 41.6
SGA_v2.0_scaffold56G20049 Striga asiatica HOM05D006304 ORTHO05D008584 6.3e-128 462.2 778 43.2
AL8G39730 Arabidopsis lyrata HOM05D006304 ORTHO05D008584 4.1e-127 459.5 688 44.3
Nitab4.5_0009895g0010 Nicotiana tabacum HOM05D006304 ORTHO05D008584 1.0e-125 454.9 827 41.2
arahy.Tifrunner.gnm1.ann1.YQHF2A Arachis hypogaea HOM05D006304 ORTHO05D008584 3.8e-125 453.0 866 40.9
A06p29540 Brassica napus HOM05D006304 ORTHO05D008584 3.2e-124 449.9 660 45.5
Ah.11g048730 Amaranthus hybridus HOM05D006304 ORTHO05D008584 5.5e-124 449.1 516 53.9
SalBow5G3794 Salvia bowleyana HOM05D006304 ORTHO05D008584 1.0e-122 444.9 865 38.3
Actinidia19056 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.0e-121 440.7 535 52.3
BcaC01g02519 Brassica carinata HOM05D006304 ORTHO05D008584 2.2e-120 437.2 673 45.5
BraA06t25899Z Brassica rapa HOM05D006304 ORTHO05D008584 2.8e-120 436.8 684 43.9
CDE06G1311 Ceratophyllum demersum HOM05D006304 ORTHO05D008584 4.8e-120 436.0 413 58.1
DCAR_021535 Daucus carota HOM05D006304 ORTHO05D008584 6.3e-120 435.6 483 53.2
C03p63960 Brassica napus HOM05D006304 ORTHO05D008584 1.8e-119 434.1 674 45.4
Solyc06g071040.4 Solanum lycopersicum HOM05D006304 ORTHO05D008584 2.0e-118 430.6 867 38.9
ECA247G4106 Erigeron canadensis HOM05D006304 ORTHO05D008584 1.7e-117 427.6 410 56.6
HanXRQChr02g0045271 Helianthus annuus HOM05D006304 ORTHO05D008584 8.0e-115 418.7 689 42.8
BolC3t18650H Brassica oleracea HOM05D006304 ORTHO05D008584 1.4e-114 417.9 701 43.7
ATR1120G178 Amborella trichopoda HOM05D006304 ORTHO05D008584 2.3e-114 417.2 465 52.7
Os02g0215000 Oryza sativa ssp. japonica HOM05D006304 ORTHO05D008584 9.1e-111 405.2 743 40.0
Peaxi162Scf00013g00025 Petunia axillaris HOM05D006304 ORTHO05D008584 3.5e-110 403.3 567 46.4
HPP92_021789 Vanilla planifolia HOM05D006304 ORTHO05D008584 2.2e-109 400.6 497 50.3
Zm00001eb240230 Zea mays HOM05D006304 ORTHO05D008584 1.1e-108 398.3 746 39.1
SEGI_29067 Sequoiadendron giganteum HOM05D006304 ORTHO05D008584 1.5e-108 397.9 417 53.7
Aa31LG11G920 Aethionema arabicum HOM05D006304 ORTHO05D008584 2.5e-108 397.1 726 41.7
Lsat_1_v5_gn_1_10941 Lactuca sativa HOM05D006304 ORTHO05D008584 3.0e-106 390.2 854 37.1
unitig_0.g2536 Utricularia gibba HOM05D006304 ORTHO05D008584 4.0e-106 389.8 406 53.7
Lalb_Chr12g0196741 Lupinus albus HOM05D006304 ORTHO05D008584 2.2e-101 374.0 293 66.9
Mapoly0068s0038 Marchantia polymorpha HOM05D006304 ORTHO05D008584 1.9e-100 370.9 412 50.2
PSO017G6991 Papaver somniferum HOM05D006304 ORTHO05D008584 3.2e-100 370.2 362 58.3
CSS0050297 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 7.5e-97 359.0 295 64.7
Oeu006477.2 Olea europaea HOM05D006304 ORTHO05D008584 2.7e-94 350.5 785 36.6
QL10p015696 Quercus lobata HOM05D006304 ORTHO05D008584 3.7e-80 303.5 652 38.5
Duzib084G0195 Durio zibethinus HOM05D006304 ORTHO05D008584 4.6e-78 296.6 360 49.7
CBR_g5693 Chara braunii HOM05D006304 ORTHO05D008584 2.5e-76 290.8 473 41.2
PGSC0003DMG402033036 Solanum tuberosum HOM05D006304 ORTHO05D008584 2.6e-41 174.5 564 32.4
Cre14.g629400 Chlamydomonas reinhardtii HOM05D006304 ORTHO05D008584 5.1e-37 160.2 204 41.7
Actinidia28212 Actinidia chinensis HOM05D006304 ORTHO05D008584 2.5e-36 157.9 181 50.3
QL10p015692 Quercus lobata HOM05D006304 ORTHO05D008584 1.3e-32 145.6 110 65.5
Duzib084G1176 Durio zibethinus HOM05D006304 ORTHO05D008584 5.5e-15 87.0 66 66.7
Lalb_Chr12g0196731 Lupinus albus HOM05D006304 ORTHO05D008584 3.0e-13 81.3 113 44.2
QL10p015689 Quercus lobata HOM05D006304 ORTHO05D008584 1.1e-07 62.8 55 63.6
Dinv19922 Davidia involucrata HOM05D006304 ORTHO05D008584 4.2e-07 60.8 57 61.4
CSS0027196 Camellia sinensis var. sinensis HOM05D006304 ORTHO05D008584 5.5e-07 60.5 54 64.8
Dinv19923 Davidia involucrata HOM05D006304 ORTHO05D008584 7.9e-06 56.6 91 39.6


User provided reference genes

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