Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G080900 Manihot esculenta HOM05D007687 ORTHO05D009692 1.6e-106 389.4 191 100.0
Manes.14G089000 Manihot esculenta HOM05D007687 ORTHO05D009692 7.4e-56 221.1 230 56.1
CiPaw.15G114100 Carya illinoinensis HOM05D007687 ORTHO05D009692 1.8e-33 146.7 190 45.8
Prupe.5G209900 Prunus persica HOM05D007687 ORTHO05D009692 3.7e-31 139.0 196 45.4
QL10p020735 Quercus lobata HOM05D007687 ORTHO05D009692 4.8e-31 138.7 228 38.2
Duzib068G1012 Durio zibethinus HOM05D007687 ORTHO05D009692 2.6e-29 132.9 217 39.2
Ciclev10024235m.g Citrus clementina HOM05D007687 ORTHO05D009692 7.2e-27 124.8 143 49.7
Duzib084G0111 Durio zibethinus HOM05D007687 ORTHO05D009692 7.2e-27 124.8 219 38.4
Duzib205G1319 Durio zibethinus HOM05D007687 ORTHO05D009692 7.2e-27 124.8 190 41.6
Thecc.03G108300 Theobroma cacao HOM05D007687 ORTHO05D009692 2.1e-26 123.2 218 39.0
Potri.015G048600 Populus trichocarpa HOM05D007687 ORTHO05D009692 7.9e-26 121.3 230 39.6
Cfa016835 Carpinus fangiana HOM05D007687 ORTHO05D009692 3.3e-24 115.9 143 46.9
Ca_21756_v3 Cicer arietinum L. HOM05D007687 ORTHO05D009692 2.1e-18 96.7 148 41.9
TAR629G0229 Trochodendron aralioides HOM05D007687 ORTHO05D009692 2.7e-18 96.3 214 35.0
FvH4_5g13402 Fragaria vesca HOM05D007687 ORTHO05D009692 1.8e-17 93.6 152 40.8
FAN18G0959 Fragaria x ananassa HOM05D007687 ORTHO05D009692 1.8e-17 93.6 152 40.8
Sed0010577 Sechium edule HOM05D007687 ORTHO05D009692 5.2e-17 92.0 193 36.8
Sabra15G0078700 Salix brachista HOM05D007687 ORTHO05D009692 1.2e-16 90.9 220 34.1
COL.COLO4_27494 Corchorus olitorius HOM05D000180 ORTHO05D009692 3.3e-16 89.4 239 33.1
Gorai.006G268500 Gossypium raimondii HOM05D007687 ORTHO05D009692 7.5e-16 88.2 175 36.0
Gohir.A09G243800 Gossypium hirsutum HOM05D007687 ORTHO05D009692 2.8e-15 86.3 183 35.5
Lj4g0013896 Lotus japonicus HOM05D007687 ORTHO05D009692 2.8e-15 86.3 178 34.3
CAN.G982.38 Capsicum annuum HOM05D007687 ORTHO05D009692 3.7e-15 85.9 225 32.0
Actinidia10442 Actinidia chinensis HOM05D007687 ORTHO05D009692 4.8e-15 85.5 220 31.4
CANSAT56G1485 Cannabis sativa HOM05D007687 ORTHO05D009692 4.8e-15 85.5 167 34.7
Rhsim01G0212900 Rhododendron simsii HOM05D006174 ORTHO05D007987 4.8e-15 85.5 136 39.7
CsaV3_1G006250 Cucumis sativus L. HOM05D007687 ORTHO05D009692 1.1e-14 84.3 238 30.7
CANSAT56G0292 Cannabis sativa HOM05D007687 ORTHO05D009692 1.4e-14 84.0 167 34.1
TPR.G7811 Trifolium pratense HOM05D007687 ORTHO05D009692 1.4e-14 84.0 155 36.8
Medtr4g109950 Medicago truncatula HOM05D007687 ORTHO05D009692 1.6e-13 80.5 155 35.5
Glyma.17G081600 Glycine max HOM05D007687 ORTHO05D009692 3.5e-13 79.3 176 34.7
MD14G1216500 Malus domestica HOM05D007687 ORTHO05D009692 7.7e-13 78.2 272 28.7
Nn4g23535 Nelumbo nucifera HOM05D007687 ORTHO05D009692 1.3e-12 77.4 170 31.2
Haze_18510 Corylus avellana HOM05D007687 ORTHO05D009692 3.8e-12 75.9 139 36.7
Nitab4.5_0005994g0030 Nicotiana tabacum HOM05D007687 ORTHO05D009692 5.0e-12 75.5 146 34.2
Medtr2g461550 Medicago truncatula HOM05D007687 ORTHO05D009692 1.9e-11 73.6 226 29.2
PGSC0003DMG400024621 Solanum tuberosum HOM05D007687 ORTHO05D009692 1.9e-11 73.6 195 32.3
Haze_19876 Corylus avellana HOM05D007687 ORTHO05D009692 2.5e-11 73.2 127 39.4
ClCG04G011570 Citrullus lanatus HOM05D007687 ORTHO05D009692 4.2e-11 72.4 180 32.8
Oeu044771.1 Olea europaea HOM05D007687 ORTHO05D009692 4.2e-11 72.4 195 32.3
Nitab4.5_0002467g0050 Nicotiana tabacum HOM05D007687 ORTHO05D009692 5.5e-11 72.0 184 31.5
VMungo1215G2041 Vigna mungo HOM05D007687 ORTHO05D009692 5.5e-11 72.0 223 30.9
Peaxi162Scf00017g03282 Petunia axillaris HOM05D007687 ORTHO05D009692 2.7e-10 69.7 190 31.1
Atru.chr4.1593 Acer truncatum HOM05D007687 ORTHO05D009692 3.6e-10 69.3 153 37.9
FAN08G0723 Fragaria x ananassa HOM05D007687 ORTHO05D009692 3.6e-10 69.3 222 31.1
A03p46570 Brassica napus HOM05D007687 ORTHO05D009692 4.7e-10 68.9 163 31.9
Cpa.g.sc3.233 Carica papaya HOM05D007687 ORTHO05D009692 4.7e-10 68.9 187 30.5
Sp2g24190 Schrenkiella parvula HOM05D007687 ORTHO05D009692 3.0e-09 66.2 183 33.3
BcaB04g19894 Brassica carinata HOM05D007687 ORTHO05D009692 4.0e-09 65.9 160 34.4
AT5G60880 Arabidopsis thaliana HOM05D007687 ORTHO05D009692 5.2e-09 65.5 158 32.9
CARHR274560 Cardamine hirsuta HOM05D007687 ORTHO05D009692 8.8e-09 64.7 177 33.3
Phvul.003G182300 Phaseolus vulgaris HOM05D007687 ORTHO05D009692 8.8e-09 64.7 231 28.6
FAN13G2354 Fragaria x ananassa HOM05D007687 ORTHO05D009692 1.2e-08 64.3 165 32.7
SGA_v2.0_scaffold105G30431 Striga asiatica HOM05D007687 ORTHO05D009692 1.5e-08 63.9 138 29.7
BraA03t13781Z Brassica rapa HOM05D007687 ORTHO05D009692 2.6e-08 63.2 175 30.9
Glyma.05G018400 Glycine max HOM05D007687 ORTHO05D009692 2.6e-08 63.2 132 37.1
BcaC04g23476 Brassica carinata HOM05D007687 ORTHO05D009692 3.4e-08 62.8 160 32.5
BraA09t36360Z Brassica rapa HOM05D007687 ORTHO05D009692 3.4e-08 62.8 160 33.8
AL8G37500 Arabidopsis lyrata HOM05D007687 ORTHO05D009692 4.4e-08 62.4 213 29.1
BcaNung02611 Brassica carinata HOM05D007687 ORTHO05D009692 4.4e-08 62.4 181 29.8
C07p44640 Brassica napus HOM05D007687 ORTHO05D009692 4.4e-08 62.4 181 29.8
C09p07960 Brassica napus HOM05D007687 ORTHO05D009692 4.4e-08 62.4 160 34.4
Solyc03g114770.3 Solanum lycopersicum HOM05D007687 ORTHO05D009692 4.4e-08 62.4 195 27.7
Sopen03g033850 Solanum pennellii HOM05D007687 ORTHO05D009692 4.4e-08 62.4 196 27.6
TWI60G1328 Tripterygium wilfordii HOM05D007687 ORTHO05D009692 4.4e-08 62.4 197 29.4
BolC9t53708H Brassica oleracea HOM05D007687 ORTHO05D009692 5.7e-08 62.0 160 33.8
Dinv07975 Davidia involucrata HOM05D007687 ORTHO05D009692 5.7e-08 62.0 78 42.3
Cc04_g08290 Coffea canephora HOM05D007687 ORTHO05D009692 7.5e-08 61.6 175 29.7
Aa31LG11G2410 Aethionema arabicum HOM05D007687 ORTHO05D009692 1.3e-07 60.8 154 35.1
A09p07100 Brassica napus HOM05D007687 ORTHO05D009692 1.3e-07 60.8 153 34.6
Gohir.D09G244500 Gossypium hirsutum HOM05D007687 ORTHO05D009692 1.7e-07 60.5 83 37.3
BolC7t44987H Brassica oleracea HOM05D007687 ORTHO05D009692 2.2e-07 60.1 181 29.8
BcaC06g33202 Brassica carinata HOM05D007687 ORTHO05D009692 1.8e-06 57.0 174 31.0
Actinidia04796 Actinidia chinensis HOM05D007687 ORTHO05D009692 2.4e-06 56.6 54 55.6
Aqoxy7G00617 Aquilegia oxysepala HOM05D035011 ORTHO05D031291 7.0e-06 55.1 145 32.4
MELO3C002053.2 Cucumis melo HOM05D007687 ORTHO05D009692 7.0e-06 55.1 147 29.3
Gorai.006G268600 Gossypium raimondii HOM05D007687 ORTHO05D009692 7.0e-06 55.1 199 26.1
unitig_8.g4497 Utricularia gibba HOM05D007687 ORTHO05D009692 7.0e-06 55.1 129 30.2


User provided reference genes

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