Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G079400 Manihot esculenta HOM05D008548 ORTHO05D010565 1.8e-72 275.8 138 100.0
Manes.14G090400 Manihot esculenta HOM05D008548 ORTHO05D010565 8.2e-49 197.2 138 75.4
Thecc.02G322600 Theobroma cacao HOM05D008548 ORTHO05D010565 2.4e-24 115.9 141 53.2
Potri.010G138001 Populus trichocarpa HOM05D008548 ORTHO05D010565 1.6e-23 113.2 145 51.7
Gohir.A13G088200 Gossypium hirsutum HOM05D008548 ORTHO05D010565 8.0e-20 100.9 139 46.8
Duzib248G0997 Durio zibethinus HOM05D008548 ORTHO05D010565 1.5e-18 96.7 139 46.0
Gohir.D13G085600 Gossypium hirsutum HOM05D008548 ORTHO05D010565 3.7e-17 92.0 141 44.0
Duzib251G0541 Durio zibethinus HOM05D008548 ORTHO05D010565 1.4e-16 90.1 141 44.0
Gohir.A03G106700 Gossypium hirsutum HOM05D008548 ORTHO05D010565 2.4e-16 89.4 141 39.7
Phvul.003G038200 Phaseolus vulgaris HOM05D008548 ORTHO05D010565 2.4e-16 89.4 147 40.8
Glyma.02G122800 Glycine max HOM05D008548 ORTHO05D010565 5.4e-16 88.2 145 39.3
Sabra08G0084500 Salix brachista HOM05D008548 ORTHO05D010565 5.4e-16 88.2 129 45.7
Gorai.013G097500 Gossypium raimondii HOM05D008548 ORTHO05D010565 9.2e-16 87.4 141 43.3
Gorai.005G147800 Gossypium raimondii HOM05D008548 ORTHO05D010565 3.0e-14 82.4 141 40.4
Rhsim09G0122000 Rhododendron simsii HOM05D008548 ORTHO05D010565 3.0e-14 82.4 149 38.9
Nn3g17542 Nelumbo nucifera HOM05D008548 ORTHO05D010565 8.6e-14 80.9 133 39.1
Prupe.1G293600 Prunus persica HOM05D008548 ORTHO05D010565 8.6e-14 80.9 145 43.4
VMungo1215G2679 Vigna mungo HOM05D008548 ORTHO05D010565 8.6e-14 80.9 148 39.2
Ciclev10033730m.g Citrus clementina HOM05D008548 ORTHO05D010565 1.1e-13 80.5 141 41.8
CiPaw.06G095100 Carya illinoinensis HOM05D008548 ORTHO05D010565 2.5e-13 79.3 140 40.0
Lj2g0005577 Lotus japonicus HOM05D008548 ORTHO05D010565 3.3e-13 79.0 144 39.6
QL03p073326 Quercus lobata HOM05D008548 ORTHO05D010565 2.1e-12 76.3 141 41.1
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 2.8e-12 75.9 107 45.8
Glyma.01G065000 Glycine max HOM05D008548 ORTHO05D010565 3.6e-12 75.5 149 37.6
CANSAT64G1261 Cannabis sativa HOM05D008548 ORTHO05D010565 4.7e-12 75.1 149 40.3
PSO017G3531 Papaver somniferum HOM05D049557 ORTHO05D010565 1.1e-11 73.9 124 39.5
Rhsim12G0071200 Rhododendron simsii HOM05D008548 ORTHO05D010565 1.1e-11 73.9 152 42.8
CiPaw.05G121500 Carya illinoinensis HOM05D008548 ORTHO05D010565 1.8e-11 73.2 148 39.9
vmacro01297 Vaccinium macrocarpon HOM05D008548 ORTHO05D010565 1.8e-11 73.2 55 65.5
Cpa.g.sc1.170 Carica papaya HOM05D008548 ORTHO05D010565 2.3e-11 72.8 56 64.3
Medtr5g048090 Medicago truncatula HOM05D008548 ORTHO05D010565 3.1e-11 72.4 42 73.8
Lalb_Chr10g0099171 Lupinus albus HOM05D008548 ORTHO05D010565 4.0e-11 72.0 112 40.2
TWI79G1579 Tripterygium wilfordii HOM05D008548 ORTHO05D010565 5.2e-11 71.6 138 40.6
arahy.Tifrunner.gnm1.ann1.R5LUMW Arachis hypogaea HOM05D008548 ORTHO05D010565 1.2e-10 70.5 144 35.4
DCAR_026688 Daucus carota HOM05D008548 ORTHO05D010565 2.0e-10 69.7 50 70.0
TPR.G38502 Trifolium pratense HOM05D008548 ORTHO05D010565 4.4e-10 68.6 144 36.8
Psat2g090800 Pisum sativum HOM05D008548 ORTHO05D010565 7.5e-10 67.8 48 60.4
Solyc05g011825.2 Solanum lycopersicum HOM05D008548 ORTHO05D010565 9.8e-10 67.4 56 55.4
Aqoxy3G00550 Aquilegia oxysepala HOM05D008548 ORTHO05D010565 1.3e-09 67.0 92 45.7
arahy.Tifrunner.gnm1.ann1.BD088N Arachis hypogaea HOM05D008548 ORTHO05D010565 2.9e-09 65.9 65 47.7
arahy.Tifrunner.gnm1.ann1.Y4YZ09 Arachis hypogaea HOM05D008548 ORTHO05D010565 2.9e-09 65.9 65 47.7
Sopen05g006580 Solanum pennellii HOM05D001549 ORTHO05D003098 4.9e-09 65.1 61 54.1
PGSC0003DMG400019660 Solanum tuberosum HOM05D008548 ORTHO05D010565 6.4e-09 64.7 45 62.2
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 3.2e-08 62.4 99 43.4
PGR119G2115 Punica granatum HOM05D008548 ORTHO05D010565 3.2e-08 62.4 134 36.6
FvH4_4g29280 Fragaria vesca HOM05D023608 ORTHO05D010565 5.4e-08 61.6 144 43.1
FAN12G2598 Fragaria x ananassa HOM05D023608 ORTHO05D010565 5.4e-08 61.6 144 43.1
SGA_v2.0_scaffold287G47189 Striga asiatica HOM05D003025 ORTHO05D003305 5.4e-08 61.6 133 31.6
Lsat_1_v5_gn_3_104501 Lactuca sativa HOM05D008548 ORTHO05D010565 2.1e-07 59.7 35 71.4
Peaxi162Scf00188g01031 Petunia axillaris HOM05D008548 ORTHO05D010565 2.1e-07 59.7 32 78.1
ClCG05G023540 Citrullus lanatus HOM05D024428 ORTHO05D025076 4.6e-07 58.5 133 33.8
FAN22G1173 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.3e-06 57.0 145 42.8
MD16G1055300 Malus domestica HOM05D008548 ORTHO05D010565 1.7e-06 56.6 141 36.2
FAN17G1069 Fragaria x ananassa HOM05D023608 ORTHO05D010565 2.3e-06 56.2 153 41.8
MD13G1056400 Malus domestica HOM05D008548 ORTHO05D010565 3.0e-06 55.8 147 36.7
Sed0002945 Sechium edule HOM05D024428 ORTHO05D025076 3.9e-06 55.5 132 34.8


User provided reference genes

Program Settings