Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G074200 Manihot esculenta HOM05D008579 ORTHO05D010245 1.7e-45 185.7 93 100.0
Manes.14G096100 Manihot esculenta HOM05D008579 ORTHO05D010245 1.0e-26 123.2 93 68.8
Potri.010G131500 Populus trichocarpa HOM05D008579 ORTHO05D010245 5.1e-18 94.4 92 57.6
Potri.008G114600 Populus trichocarpa HOM05D008579 ORTHO05D010245 1.9e-17 92.4 93 54.8
Thecc.02G363200 Theobroma cacao HOM05D008579 ORTHO05D010245 9.6e-17 90.1 97 52.6
Gohir.A12G172600 Gossypium hirsutum HOM05D008579 ORTHO05D010245 6.8e-15 84.0 90 53.3
Gohir.D12G175100 Gossypium hirsutum HOM05D008579 ORTHO05D010245 6.8e-15 84.0 90 53.3
Gorai.008G187700 Gossypium raimondii HOM05D008579 ORTHO05D010245 1.5e-14 82.8 93 51.6
Ciclev10033191m.g Citrus clementina HOM05D008579 ORTHO05D010245 2.0e-14 82.4 94 52.1
Prupe.1G303500 Prunus persica HOM05D008579 ORTHO05D010245 4.9e-13 77.8 96 47.9
Nn4g23678 Nelumbo nucifera HOM05D008579 ORTHO05D010245 1.2e-11 73.2 90 47.8
Haze_17414 Corylus avellana HOM05D008579 ORTHO05D010245 2.7e-11 72.0 76 50.0
Hma1.2p1_0605F.1_g187880 Hydrangea macrophylla HOM05D008579 ORTHO05D010245 3.5e-11 71.6 87 47.1
RcHm_v2.0_Chr4g0436131 Rosa chinensis HOM05D008579 ORTHO05D010245 3.0e-10 68.6 71 45.1
COL.COLO4_07854 Corchorus olitorius HOM05D008579 ORTHO05D010245 8.7e-10 67.0 36 80.6
Sabra08G0086800 Salix brachista HOM05D008579 ORTHO05D010245 1.1e-09 66.6 82 46.3
QL01p000876 Quercus lobata HOM05D008579 ORTHO05D010245 1.5e-09 66.2 90 37.8
CsaV3_5G033860 Cucumis sativus L. HOM05D008579 ORTHO05D010245 9.6e-09 63.5 63 50.8
Glyma.10G205400 Glycine max HOM05D008579 ORTHO05D010245 1.3e-08 63.2 81 45.7
Sed0026635 Sechium edule HOM05D008579 ORTHO05D010245 1.3e-08 63.2 94 43.6
Sed0027044 Sechium edule HOM05D008579 ORTHO05D010245 2.1e-08 62.4 91 45.1
ClCG01G005780 Citrullus lanatus HOM05D008579 ORTHO05D010245 2.8e-08 62.0 91 44.0
Phvul.007G101400 Phaseolus vulgaris HOM05D008579 ORTHO05D010245 1.1e-07 60.1 88 42.0
Glyma.20G185000 Glycine max HOM05D008579 ORTHO05D010245 1.4e-07 59.7 74 43.2
Sed0005216 Sechium edule HOM05D008579 ORTHO05D010245 1.8e-07 59.3 57 50.9
Glyma.02G131300 Glycine max HOM05D008579 ORTHO05D010245 4.0e-07 58.2 89 38.2
ClCG05G023140 Citrullus lanatus HOM05D008579 ORTHO05D010245 6.9e-07 57.4 82 45.1
Lsat_1_v5_gn_4_17220 Lactuca sativa HOM05D008579 ORTHO05D010245 9.0e-07 57.0 94 40.4
Lalb_Chr02g0151861 Lupinus albus HOM05D008579 ORTHO05D010245 1.2e-06 56.6 90 35.6
MELO3C012204.2 Cucumis melo HOM05D008579 ORTHO05D010245 1.5e-06 56.2 63 49.2
Lj3g0023630 Lotus japonicus HOM05D008579 ORTHO05D010245 1.5e-06 56.2 88 37.5
Lj5g0012204 Lotus japonicus HOM05D008579 ORTHO05D010245 1.5e-06 56.2 88 37.5
Eucgr.G02368 Eucalyptus grandis HOM05D008579 ORTHO05D010245 2.6e-06 55.5 85 41.2
Nn3g17676 Nelumbo nucifera HOM05D008579 ORTHO05D010245 4.4e-06 54.7 42 57.1
Glyma.01G090400 Glycine max HOM05D008579 ORTHO05D010245 5.8e-06 54.3 89 39.3
PGSC0003DMG400017624 Solanum tuberosum HOM05D013623 ORTHO05D014564 5.8e-06 54.3 78 41.0
AT1G68765 Arabidopsis thaliana HOM05D010485 ORTHO05D010245 9.9e-06 53.5 81 43.2


User provided reference genes

Program Settings