Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 1.4e-187 659.4 329 100.0
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 2.6e-141 505.8 331 75.5
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 2.6e-141 505.8 331 75.5
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 1.6e-138 496.5 330 74.8
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.1e-136 490.3 330 75.8
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 2.3e-134 482.6 330 75.5
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 5.8e-133 478.0 331 71.9
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 6.4e-132 474.6 331 72.2
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 2.0e-130 469.5 332 72.3
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.1e-128 463.8 332 71.7
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.5e-128 463.4 331 70.7
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 2.5e-128 462.6 333 70.9
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 4.3e-128 461.8 332 71.4
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 5.6e-128 461.5 332 71.4
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 2.1e-127 459.5 331 70.1
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 3.1e-126 455.7 331 68.9
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 4.0e-126 455.3 314 73.2
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 8.9e-126 454.1 331 70.1
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 1.7e-124 449.9 331 68.6
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 2.9e-124 449.1 330 68.5
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.1e-123 447.2 331 68.6
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.4e-123 446.8 331 68.3
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 4.1e-123 445.3 328 68.6
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 7.1e-123 444.5 326 68.4
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 1.2e-122 443.7 328 66.8
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 4.6e-122 441.8 330 66.7
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 7.8e-122 441.0 328 68.0
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 3.9e-121 438.7 328 66.5
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 3.9e-121 438.7 331 66.2
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 6.2e-119 431.4 331 68.6
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 1.1e-118 430.6 337 65.3
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 1.4e-118 430.3 328 66.2
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 5.2e-118 428.3 330 67.3
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 1.5e-117 426.8 330 64.8
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 3.4e-117 425.6 328 65.9
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 4.4e-117 425.2 328 65.5
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 4.4e-117 425.2 331 66.5
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 4.4e-117 425.2 333 66.4
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 5.8e-117 424.9 331 67.7
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 1.7e-116 423.3 328 64.9
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 4.9e-116 421.8 331 66.2
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 4.9e-116 421.8 331 66.2
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 1.1e-115 420.6 331 66.2
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 1.4e-115 420.2 330 63.6
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 2.4e-115 419.5 331 66.2
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 3.2e-115 419.1 332 67.2
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 7.1e-115 417.9 332 62.3
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 7.1e-115 417.9 331 65.6
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 9.2e-115 417.5 328 65.5
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 2.7e-114 416.0 332 62.3
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 3.5e-114 415.6 332 63.3
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 1.0e-113 414.1 334 65.6
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 8.7e-113 411.0 331 63.7
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 1.9e-112 409.8 333 63.7
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 4.3e-112 408.7 331 65.0
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 1.2e-111 407.1 330 63.9
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 1.6e-111 406.8 331 64.7
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.7e-111 405.2 331 62.2
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 1.4e-110 403.7 335 61.2
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 1.8e-110 403.3 295 68.8
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 2.4e-110 402.9 331 64.0
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 9.0e-110 401.0 331 60.7
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 3.4e-109 399.1 334 64.1
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 3.4e-109 399.1 295 67.8
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 6.4e-108 394.8 370 57.3
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 1.9e-107 393.3 333 61.9
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.9e-107 393.3 332 61.7
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 2.4e-107 392.9 333 61.6
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 2.4e-107 392.9 330 61.5
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 3.2e-107 392.5 333 62.2
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 9.3e-107 391.0 331 61.3
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 4.6e-106 388.7 331 63.1
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 7.8e-106 387.9 331 62.5
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 1.3e-105 387.1 331 62.5
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 3.0e-105 386.0 332 60.2
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 3.9e-105 385.6 288 66.7
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 6.6e-105 384.8 333 60.4
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 8.7e-105 384.4 350 57.7
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 1.1e-104 384.0 331 62.8
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.1e-104 384.0 333 60.7
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 3.3e-104 382.5 331 62.8
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 9.6e-104 380.9 334 60.8
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 1.3e-103 380.6 331 60.4
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 2.4e-102 376.3 303 64.4
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 1.2e-101 374.0 331 60.1
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 1.2e-98 364.0 331 58.3
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 1.3e-97 360.5 295 60.7
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 8.1e-95 351.3 335 59.1
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 9.3e-91 337.8 329 52.0
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.5e-85 318.9 304 55.6
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 2.7e-82 309.7 252 61.5
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.8e-73 280.4 330 46.4
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 3.9e-73 279.3 287 50.5
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 3.9e-73 279.3 287 50.5
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 7.4e-72 275.0 287 51.6
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 4.8e-71 272.3 330 41.5
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.2e-66 257.7 332 42.2
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.8e-62 243.8 189 67.7
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.8e-62 243.8 189 67.2
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 4.7e-58 229.2 332 38.9
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 9.1e-54 214.9 156 71.2
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.2e-53 214.5 153 67.3
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 5.3e-46 189.1 168 57.1
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 4.5e-45 186.0 154 64.3
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 1.7e-44 184.1 145 60.0
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 9.4e-43 178.3 146 67.1
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 9.8e-32 141.7 122 54.9
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 7.0e-30 135.6 96 70.8
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.6e-29 134.4 121 64.5
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 1.2e-24 118.2 109 58.7
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 3.2e-22 110.2 90 61.1
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 7.3e-19 99.0 92 52.2
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 9.2e-14 82.0 59 69.5
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 6.4e-07 59.3 50 60.0


User provided reference genes

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