Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G072200 Manihot esculenta HOM05D004326 ORTHO05D004570 5.6e-19 96.7 51 100.0
Manes.14G097600 Manihot esculenta HOM05D004326 ORTHO05D004570 1.2e-13 79.0 51 84.3
CANSAT64G1998 Cannabis sativa HOM05D004326 ORTHO05D004570 2.7e-13 77.8 51 80.4
Gorai.008G186200 Gossypium raimondii HOM05D004326 ORTHO05D004570 3.5e-13 77.4 51 78.4
Gohir.A12G170400 Gossypium hirsutum HOM05D004326 ORTHO05D004570 4.6e-13 77.0 51 76.5
Duzib268G0802 Durio zibethinus HOM05D004326 ORTHO05D004570 6.0e-13 76.6 44 81.8
Gohir.D12G173600 Gossypium hirsutum HOM05D004326 ORTHO05D004570 7.8e-13 76.3 51 76.5
Thecc.02G361000 Theobroma cacao HOM05D004326 ORTHO05D004570 1.3e-12 75.5 51 76.5
CARHR013620 Cardamine hirsuta HOM05D004326 ORTHO05D004570 1.7e-12 75.1 51 78.4
Atru.chr11.1355 Acer truncatum HOM05D004326 ORTHO05D004570 2.3e-12 74.7 51 76.5
Duzib251G0285 Durio zibethinus HOM05D004326 ORTHO05D004570 2.3e-12 74.7 51 74.5
Glyma.20G185900 Glycine max HOM05D004326 ORTHO05D004570 3.0e-12 74.3 51 78.4
Carub.0001s1297 Capsella rubella HOM05D004326 ORTHO05D004570 3.9e-12 73.9 51 76.5
Gohir.D13G069701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 5.1e-12 73.6 51 74.5
A08p32390 Brassica napus HOM05D004326 ORTHO05D004570 6.6e-12 73.2 44 81.8
Gohir.A13G053100 Gossypium hirsutum HOM05D004326 ORTHO05D004570 6.6e-12 73.2 51 74.5
Phvul.007G102250 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 6.6e-12 73.2 51 76.5
Potri.008G116700 Populus trichocarpa HOM05D004326 ORTHO05D004570 6.6e-12 73.2 51 74.5
AL1G24940 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 8.7e-12 72.8 40 85.0
AT1G13245 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 8.7e-12 72.8 40 85.0
A06p08510 Brassica napus HOM05D004326 ORTHO05D004570 8.7e-12 72.8 51 76.5
C05p10110 Brassica napus HOM05D004326 ORTHO05D004570 8.7e-12 72.8 51 76.5
Glyma.10G204600 Glycine max HOM05D004326 ORTHO05D004570 8.7e-12 72.8 51 76.5
Potri.010G129600 Populus trichocarpa HOM05D004326 ORTHO05D004570 8.7e-12 72.8 51 74.5
CiPaw.15G003600 Carya illinoinensis HOM05D004326 ORTHO05D004570 1.5e-11 72.0 51 72.5
THA.LOC104805244 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.5e-11 72.0 51 74.5
THA.LOC104825713 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.5e-11 72.0 51 74.5
BolC5t29757H Brassica oleracea HOM05D004326 ORTHO05D004570 2.5e-11 71.2 40 85.0
BraA06t24046Z Brassica rapa HOM05D004326 ORTHO05D004570 2.5e-11 71.2 40 85.0
BraA08t35162Z Brassica rapa HOM05D004326 ORTHO05D004570 2.5e-11 71.2 40 85.0
C08p16040 Brassica napus HOM05D004326 ORTHO05D004570 3.3e-11 70.9 44 79.5
PGR119G2456 Punica granatum HOM05D004326 ORTHO05D004570 3.3e-11 70.9 51 74.5
BolC8t49226H Brassica oleracea HOM05D004326 ORTHO05D004570 4.3e-11 70.5 40 85.0
CAN.G184.91 Capsicum annuum HOM05D004326 ORTHO05D004570 5.6e-11 70.1 51 70.6
TWI79G1601 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 7.3e-11 69.7 52 75.0
TWI31G0110 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 9.6e-11 69.3 53 73.6
Oeu058414.1 Olea europaea HOM05D004326 ORTHO05D004570 1.3e-10 68.9 51 70.6
Eucgr.G02348 Eucalyptus grandis HOM05D004326 ORTHO05D004570 2.8e-10 67.8 51 70.6
Glyma.10G129200 Glycine max HOM05D004326 ORTHO05D004570 4.8e-10 67.0 51 72.5
Lalb_Chr17g0341881 Lupinus albus HOM05D004326 ORTHO05D004570 4.8e-10 67.0 53 67.9
Lalb_Chr02g0151761 Lupinus albus HOM05D004326 ORTHO05D004570 6.2e-10 66.6 50 62.0
A06p42560 Brassica napus HOM05D004326 ORTHO05D004570 8.1e-10 66.2 41 82.9
BraA06t27171Z Brassica rapa HOM05D004326 ORTHO05D004570 8.1e-10 66.2 41 82.9
Lalb_Chr10g0099751 Lupinus albus HOM05D004326 ORTHO05D004570 8.1e-10 66.2 53 69.8
PGR102G0365 Punica granatum HOM05D004326 ORTHO05D004570 8.1e-10 66.2 52 73.1
Glyma.01G088000 Glycine max HOM05D004326 ORTHO05D004570 1.1e-09 65.9 52 73.1
Glyma.02G100100 Glycine max HOM05D004326 ORTHO05D004570 1.1e-09 65.9 52 73.1
MD13G1046500 Malus domestica HOM05D004326 ORTHO05D004570 1.1e-09 65.9 54 70.4
MD16G1048200 Malus domestica HOM05D004326 ORTHO05D004570 1.1e-09 65.9 54 70.4
PSO017G5195 Papaver somniferum HOM05D004326 ORTHO05D004570 1.4e-09 65.5 48 68.8
Prupe.1G305400 Prunus persica HOM05D004326 ORTHO05D004570 1.4e-09 65.5 52 71.2
AT3G25717 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 1.8e-09 65.1 41 80.5
A09p24960 Brassica napus HOM05D004326 ORTHO05D004570 1.8e-09 65.1 41 80.5
BraA09t38084Z Brassica rapa HOM05D004326 ORTHO05D004570 1.8e-09 65.1 41 80.5
Carub.0005s0354 Capsella rubella HOM05D004326 ORTHO05D004570 1.8e-09 65.1 41 80.5
Duzib138G0964 Durio zibethinus HOM05D004326 ORTHO05D004570 2.4e-09 64.7 51 66.7
Gohir.A07G168701 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.4e-09 64.7 48 64.6
Gohir.D07G179500 Gossypium hirsutum HOM05D004326 ORTHO05D004570 2.4e-09 64.7 48 64.6
Gorai.001G200500 Gossypium raimondii HOM05D004326 ORTHO05D004570 2.4e-09 64.7 48 64.6
PSO478G3685 Papaver somniferum HOM05D004326 ORTHO05D004570 2.4e-09 64.7 49 67.3
Migut.K01265 Erythranthe guttata HOM05D004326 ORTHO05D004570 4.0e-09 63.9 51 64.7
PSO063G2411 Papaver somniferum HOM05D004326 ORTHO05D004570 4.0e-09 63.9 51 68.6
PSO782G5714 Papaver somniferum HOM05D004326 ORTHO05D004570 4.0e-09 63.9 51 68.6
MELO3C008521.2 Cucumis melo HOM05D004326 ORTHO05D004570 5.3e-09 63.5 54 68.5
CiPaw.03G059200 Carya illinoinensis HOM05D004326 ORTHO05D004570 6.9e-09 63.2 43 72.1
Lalb_Chr06g0170221 Lupinus albus HOM05D004326 ORTHO05D004570 9.0e-09 62.8 37 70.3
Migut.K00857 Erythranthe guttata HOM05D004326 ORTHO05D004570 1.2e-08 62.4 40 75.0
Potri.017G112100 Populus trichocarpa HOM05D004326 ORTHO05D004570 2.0e-08 61.6 51 62.7
BolC7t43991H Brassica oleracea HOM05D004326 ORTHO05D004570 2.6e-08 61.2 41 78.0
CANSAT64G0444 Cannabis sativa HOM05D004326 ORTHO05D004570 3.4e-08 60.8 51 62.7
Solyc02g065570.1 Solanum lycopersicum HOM05D004326 ORTHO05D004570 3.4e-08 60.8 51 62.7
THA.LOC109116167 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 3.4e-08 60.8 51 58.8
Thecc.04G138400 Theobroma cacao HOM05D004326 ORTHO05D004570 3.4e-08 60.8 51 62.7
Carub.0002s1541 Capsella rubella HOM05D004326 ORTHO05D004570 4.4e-08 60.5 49 61.2
ClCG03G009910 Citrullus lanatus HOM05D004326 ORTHO05D004570 4.4e-08 60.5 39 74.4
Migut.H00527 Erythranthe guttata HOM05D004326 ORTHO05D004570 4.4e-08 60.5 39 69.2
Glyma.08G256500 Glycine max HOM05D004326 ORTHO05D004570 5.8e-08 60.1 37 73.0
Phvul.008G020301 Phaseolus vulgaris HOM05D004326 ORTHO05D004570 5.8e-08 60.1 44 65.9
AL2G27790 Arabidopsis lyrata HOM05D004326 ORTHO05D004570 7.6e-08 59.7 49 59.2
AT1G68825 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 7.6e-08 59.7 49 59.2
C06p37300 Brassica napus HOM05D004326 ORTHO05D004570 7.6e-08 59.7 49 59.2
CAN.G93.32 Capsicum annuum HOM05D004326 ORTHO05D004570 9.9e-08 59.3 51 62.7
PGSC0003DMG400007475 Solanum tuberosum HOM05D004326 ORTHO05D004570 9.9e-08 59.3 33 81.8
CAN.G497.3 Capsicum annuum HOM05D004326 ORTHO05D004570 1.3e-07 58.9 37 75.7
Potri.004G102950 Populus trichocarpa HOM05D004326 ORTHO05D004570 1.3e-07 58.9 51 60.8
THA.LOC109117025 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 1.3e-07 58.9 51 56.9
TWI56G0546 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 1.3e-07 58.9 44 63.6
TWI12G0968 Tripterygium wilfordii HOM05D004326 ORTHO05D004570 2.2e-07 58.2 51 60.8
Glyma.02G099000 Glycine max HOM05D004326 ORTHO05D004570 2.9e-07 57.8 39 69.2
Glyma.12G187300 Glycine max HOM05D004326 ORTHO05D004570 2.9e-07 57.8 46 71.7
Medtr1g093650 Medicago truncatula HOM05D004326 ORTHO05D004570 2.9e-07 57.8 42 73.8
Migut.L01097 Erythranthe guttata HOM05D004326 ORTHO05D004570 4.9e-07 57.0 52 63.5
Glyma.18G280800 Glycine max HOM05D004326 ORTHO05D004570 4.9e-07 57.0 49 59.2
Lalb_Chr17g0336511 Lupinus albus HOM05D004326 ORTHO05D004570 4.9e-07 57.0 37 67.6
Prupe.5G217900 Prunus persica HOM05D004326 ORTHO05D004570 6.4e-07 56.6 51 60.8
THA.LOC109117071 Tarenaya hassleriana HOM05D004326 ORTHO05D004570 6.4e-07 56.6 36 72.2
FvH4_6g45391 Fragaria vesca HOM05D004326 ORTHO05D004570 1.1e-06 55.8 36 66.7
FAN14G2544 Fragaria x ananassa HOM05D004326 ORTHO05D004570 1.1e-06 55.8 36 66.7
FAN14G3188 Fragaria x ananassa HOM05D004326 ORTHO05D004570 1.1e-06 55.8 36 66.7
PGR083G2212 Punica granatum HOM05D004326 ORTHO05D004570 1.1e-06 55.8 47 63.8
Carub.0002s1354 Capsella rubella HOM05D004326 ORTHO05D004570 1.4e-06 55.5 39 64.1
Thhalv10015386m.g Eutrema salsugineum HOM05D004326 ORTHO05D004570 1.4e-06 55.5 36 69.4
MD09G1083800 Malus domestica HOM05D004326 ORTHO05D004570 1.4e-06 55.5 51 49.0
CiPaw.15G127400 Carya illinoinensis HOM05D004326 ORTHO05D004570 1.9e-06 55.1 51 52.9
Glyma.09G227700 Glycine max HOM05D018086 ORTHO05D004570 1.9e-06 55.1 41 58.5
Glyma.12G009000 Glycine max HOM05D018086 ORTHO05D004570 1.9e-06 55.1 41 58.5
Manes.01G107900 Manihot esculenta HOM05D004326 ORTHO05D004570 2.4e-06 54.7 53 56.6
Manes.02G066501 Manihot esculenta HOM05D004326 ORTHO05D004570 2.4e-06 54.7 51 54.9
RcHm_v2.0_Chr2g0163211 Rosa chinensis HOM05D004326 ORTHO05D004570 2.4e-06 54.7 46 58.7
AT1G67265 Arabidopsis thaliana HOM05D004326 ORTHO05D004570 3.2e-06 54.3 39 61.5
A03p07530 Brassica napus HOM05D004326 ORTHO05D004570 5.4e-06 53.5 36 66.7
C03p08740 Brassica napus HOM05D004326 ORTHO05D004570 5.4e-06 53.5 36 66.7
BolC3t13372H Brassica oleracea HOM05D004326 ORTHO05D004570 5.4e-06 53.5 36 66.7
BraA03t10081Z Brassica rapa HOM05D004326 ORTHO05D004570 5.4e-06 53.5 36 66.7
Carub.0006s1421 Capsella rubella HOM05D004326 ORTHO05D004570 5.4e-06 53.5 51 52.9
Lalb_Chr19g0140251 Lupinus albus HOM05D018086 ORTHO05D004570 5.4e-06 53.5 50 52.0
Phvul.011G012200 Phaseolus vulgaris HOM05D018086 ORTHO05D004570 5.4e-06 53.5 41 58.5
A10p23030 Brassica napus HOM05D004326 ORTHO05D004570 7.1e-06 53.1 51 54.9
BolC9t58947H Brassica oleracea HOM05D004326 ORTHO05D004570 7.1e-06 53.1 51 54.9
BraA10t44372Z Brassica rapa HOM05D004326 ORTHO05D004570 7.1e-06 53.1 51 54.9
Duzib068G0156 Durio zibethinus HOM05D004326 ORTHO05D004570 7.1e-06 53.1 51 56.9
Duzib084G0446 Durio zibethinus HOM05D004326 ORTHO05D004570 7.1e-06 53.1 54 59.3
PSO063G2252 Papaver somniferum HOM05D004326 ORTHO05D004570 7.1e-06 53.1 31 77.4
Prupe.3G240100 Prunus persica HOM05D004326 ORTHO05D004570 7.1e-06 53.1 52 51.9


User provided reference genes

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