Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 8.5e-213 743.4 381 100.0
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 6.2e-163 577.8 379 76.8
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 5.8e-153 544.7 379 72.6
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 9.9e-145 517.3 379 67.8
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 1.8e-141 506.5 377 67.9
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 1.4e-138 496.9 379 67.3
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 4.5e-137 491.9 371 66.6
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 1.7e-136 490.0 379 65.7
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 2.2e-136 489.6 380 66.8
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 3.8e-136 488.8 379 65.4
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.1e-135 487.3 379 65.2
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 9.6e-132 474.2 379 63.3
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 1.6e-131 473.4 380 64.5
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 1.5e-129 466.8 362 66.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.0e-129 466.5 357 67.5
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 5.8e-129 464.9 379 62.0
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.2e-128 463.0 379 61.7
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.9e-128 461.8 379 62.8
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 8.4e-128 461.1 364 64.6
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 8.4e-128 461.1 381 61.7
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 4.2e-127 458.8 378 61.9
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.3e-125 453.8 380 62.1
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.8e-125 453.4 355 65.1
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 3.9e-125 452.2 358 65.4
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 1.4e-122 443.7 380 61.3
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 2.6e-121 439.5 381 59.6
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 3.4e-121 439.1 380 59.5
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 1.1e-119 434.1 380 60.0
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 7.9e-118 427.9 365 61.4
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 5.7e-116 421.8 380 57.9
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.3e-115 420.6 379 58.0
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 1.7e-115 420.2 379 58.0
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 4.8e-115 418.7 381 57.7
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.2e-112 409.8 381 56.2
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.8e-112 409.1 319 65.2
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 7.2e-111 404.8 365 57.0
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 7.2e-111 404.8 378 54.0
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 2.7e-110 402.9 379 55.1
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 3.6e-110 402.5 379 54.4
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 7.9e-110 401.4 363 54.8
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 1.0e-109 401.0 385 56.1
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 5.1e-109 398.7 379 54.1
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 6.7e-109 398.3 378 55.6
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 6.7e-109 398.3 357 58.5
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 7.4e-108 394.8 379 53.3
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 3.7e-107 392.5 379 53.6
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 6.3e-107 391.7 339 60.5
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 6.3e-107 391.7 378 55.0
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 2.4e-106 389.8 378 54.5
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 2.2e-104 383.3 379 53.0
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 2.9e-104 382.9 381 53.5
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 2.5e-103 379.8 379 52.0
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 2.7e-102 376.3 379 53.6
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 2.7e-102 376.3 381 53.0
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 3.6e-102 375.9 367 55.9
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 4.7e-102 375.6 380 52.4
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 3.3e-100 369.4 381 52.2
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 4.1e-98 362.5 365 52.6
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 1.5e-95 354.0 369 50.7
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 2.7e-94 349.7 302 58.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 4.7e-94 349.0 379 48.8
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.8e-93 347.1 270 67.8
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 3.0e-93 346.3 385 47.5
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 8.8e-93 344.7 382 46.6
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 3.7e-91 339.3 265 68.7
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 6.3e-91 338.6 381 46.7
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 8.5e-88 328.2 381 46.7
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 5.5e-87 325.5 381 46.2
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 9.4e-87 324.7 381 46.5
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.6e-86 323.9 385 49.1
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 3.0e-85 319.7 371 46.1
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 4.0e-85 319.3 262 63.4
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 4.4e-84 315.8 382 44.5
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 9.8e-84 314.7 380 45.5
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 1.3e-83 314.3 371 45.8
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 2.8e-83 313.2 371 45.8
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 8.3e-83 311.6 364 45.3
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.8e-82 310.5 380 45.5
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 1.6e-81 307.4 367 45.2
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 1.3e-80 304.3 480 39.4
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 2.3e-80 303.5 405 41.2
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 2.9e-80 303.1 380 44.2
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 2.5e-79 300.1 382 44.0
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 7.2e-79 298.5 372 44.1
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 9.5e-79 298.1 371 45.8
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 4.0e-69 266.2 238 62.6
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 2.6e-68 263.5 263 55.1
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.7e-67 260.8 380 40.3
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 7.0e-66 255.4 381 40.7
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 9.5e-63 245.0 257 49.0
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.6e-60 236.9 382 39.8
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 1.5e-52 211.1 372 38.4
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 3.0e-48 196.8 370 37.8
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 3.0e-48 196.8 264 43.2
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 2.5e-47 193.7 368 37.5
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 6.0e-41 172.6 115 67.8
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.1e-39 168.3 140 61.4
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 7.3e-39 165.6 133 63.9
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 4.2e-34 149.8 115 57.4
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.5e-33 146.7 348 34.5
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.6e-30 137.9 196 41.8
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 3.6e-30 136.7 329 34.3
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 4.8e-30 136.3 170 44.7
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 2.0e-28 131.0 305 34.4
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 9.3e-26 122.1 147 46.9
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 9.6e-23 112.1 114 55.3
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 1.6e-22 111.3 424 27.8
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.8e-22 110.5 152 46.7
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 4.5e-20 103.2 103 53.4
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 4.3e-07 60.1 229 27.5


User provided reference genes

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